RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SAAL1Q96ER3 474 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 KIFC3Q9BVG8 833 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 FAM114A2Q9NRY5 505 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 PTPN22Q9Y2R2 807 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 ZHX2Q9Y6X8 837 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 SGPL1O95470 568 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 ZNF131P52739 623 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 PPATQ06203 517 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 MTMR3Q13615 1198 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 CPNE8Q86YQ8 564 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 RTKN2Q8IZC4 609 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 RAB17Q9H0T7 212 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 COL20A1Q9P218 1284 aa15.17■□□□□ 0.02
ATP2C1-201ENST00000328560 H0YGN5 161 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 CYP26A1O43174 497 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 FAM102BQ5T8I3 360 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 PHLDB2Q86SQ0 1253 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 NIM1KQ8IY84 436 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 OLIG1Q8TAK6 271 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 RANBP17Q9H2T7 1088 aaKnown RBP15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 NFS1Q9Y697 457 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 SP4Q02446 784 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 LRIG3Q6UXM1 1119 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 HAUS6Q7Z4H7 955 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 MDM1Q8TC05 714 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 FAM84AQ96KN4 292 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 POP1Q99575 1024 aaKnown RBP15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 ZNF341Q9BYN7 854 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 HSPBP1Q9NZL4 362 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 LTBP1Q14766 1721 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 SPOPO43791 374 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 GUCY2CP25092 1073 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 MXI1P50539 228 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 PLA2G4FQ68DD2 849 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 INTS8Q75QN2 995 aaKnown RBP15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 CCDC25Q86WR0 208 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 XXYLT1Q8NBI6 393 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 ACCSQ96QU6 501 aa15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 RAVER2Q9HCJ3 691 aaKnown RBP15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 CNOT8Q9UFF9 292 aaKnown RBP15.16■□□□□ 0.02
ATP2C1-201ENST00000328560 SCN9AQ15858 1988 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 SORBS3O60504 671 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 CALCAP01258 141 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 SETQ01105 290 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 EN1Q05925 392 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 FAM160B2Q86V87 743 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 NAP1L3Q99457 506 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 SELENOSQ9BQE4 189 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 CCDC113Q9H0I3 377 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 ATRNL1Q5VV63 1379 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 NCANO14594 1321 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 P4HBP07237 508 aaKnown RBP15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 COMTP21964 271 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 JAMLQ86YT9 394 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 UBL4BQ8N7F7 174 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 FBXO25Q8TCJ0 367 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 ERP44Q9BS26 406 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 CARD9Q9H257 536 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 PPP1R1BQ9UD71 204 aaPredicted RBP15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 SHBGP04278 402 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 SLCO1A2P46721 670 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 KCNJ1P48048 391 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 PTENP60484 403 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 SF3B2Q13435 895 aaKnown RBP15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 XKR9Q5GH70 373 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 CBWD2Q8IUF1 395 aa15.15■□□□□ 0.02
ATP2C1-201ENST00000328560 ANKRD31Q8N7Z5 1873 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 RARRES1P49788 294 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 PPP2R2AP63151 447 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 GPC5P78333 572 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 MICALCLQ6ZW33 695 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 RHOT2Q8IXI1 618 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 LMO3Q8TAP4 145 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 PLEKHO2Q8TD55 490 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 KAT2BQ92831 832 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 TMEM206Q9H813 350 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 GREB1LQ9C091 1923 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 TESPA1A2RU30 521 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 MEFVO15553 781 aaPredicted RBP15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 ASNSP08243 561 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 SOX10P56693 466 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 MTMR1Q13613 665 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 KIF22Q14807 665 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 CCDC105Q8IYK2 499 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 PCDHB18PQ96TA0 734 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 RIT2Q99578 217 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 SYT11Q9BT88 431 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 PNMA2Q9UL42 364 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 LRRC37AA6NMS7 1700 aa15.14■□□□□ 0.01
ATP2C1-201ENST00000328560 GMNCA6NCL1 334 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 CAND2O75155 1236 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 YWHABP31946 246 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 QARSP47897 775 aaKnown RBP15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 EPC2Q52LR7 807 aa15.13■□□□□ 0.01
ATP2C1-201ENST00000328560 KCTD17Q8N5Z5 321 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms