RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 MOXD1Q6UVY6 613 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 ZDHHC14Q8IZN3 488 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 KIF2BQ8N4N8 673 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 KCTD17Q8N5Z5 321 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 ENDOVQ8N8Q3 282 aaKnown RBP12.12□□□□□ -0.47
GINS3-202ENST00000328514 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 TGFBRAP1Q8WUH2 860 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 RNPEPL1Q9HAU8 725 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 TFCP2L1Q9NZI6 479 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 WHRNQ9P202 907 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 KLHL14Q9P2G3 628 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 LGALS13Q9UHV8 139 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 KAT6BQ8WYB5 2073 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 PASKQ96RG2 1323 aa12.12□□□□□ -0.47
GINS3-202ENST00000328514 ARFGEF1Q9Y6D6 1849 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 TP73O15350 636 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 HIP1RO75146 1068 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 KRT18P05783 430 aaKnown RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 KRT13P13646 458 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 COILP38432 576 aaPredicted RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 SLCO1A2P46721 670 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 MRPS35P82673 323 aaKnown RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 LBRQ14739 615 aaKnown RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 TAF11Q15544 211 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 KCTD19Q17RG1 926 aaPredicted RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 AP1ARQ63HQ0 302 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 CGB2Q6NT52 195 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 GJB7Q6PEY0 223 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 AGGF1Q8N302 714 aaeCLIP12.11□□□□□ -0.47
GINS3-202ENST00000328514 FBF1Q8TES7 1133 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 INPP5DQ92835 1189 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 UTP4Q969X6 686 aaKnown RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 RMDN2Q96LZ7 410 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 GLT8D2Q9H1C3 349 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 MYO3BQ8WXR4 1341 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 EME2A4GXA9 379 aaPredicted RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 MAGEB2O15479 319 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 MARCH6O60337 910 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 MED24O75448 989 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 NPTXRO95502 500 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 PECAM1P16284 738 aaPredicted RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 SPIRE1Q08AE8 756 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 MGAT5Q09328 741 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 DRAP1Q14919 205 aaPredicted RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 RBBP5Q15291 538 aaKnown RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 SIX1Q15475 284 aaPredicted RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 SLC15A2Q16348 729 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 ADAT2Q7Z6V5 191 aaKnown RBP12.11□□□□□ -0.47
GINS3-202ENST00000328514 SFR1Q86XK3 245 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 SLFN12Q8IYM2 578 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 CD101Q93033 1021 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 REEP2Q9BRK0 252 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 THAP2Q9H0W7 228 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 WNT8AQ9H1J5 351 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 LRRC19Q9H756 370 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 AAASQ9NRG9 546 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 OLFML3Q9NRN5 406 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 CDK5RAP2Q96SN8 1893 aa12.11□□□□□ -0.47
GINS3-202ENST00000328514 ADGRA3Q8IWK6 1321 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 EIF3DO15371 548 aaKnown RBP eCLIP12.1□□□□□ -0.47
GINS3-202ENST00000328514 PLCG2P16885 1265 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 ATP4AP20648 1035 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 ATP6V1C1P21283 382 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 RPA1P27694 616 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 PSMC2P35998 433 aaKnown RBP12.1□□□□□ -0.47
GINS3-202ENST00000328514 CASP4P49662 377 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 YARSP54577 528 aaKnown RBP12.1□□□□□ -0.47
GINS3-202ENST00000328514 NBPF20Q3BBV1 942 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 TCERG1LQ5VWI1 586 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 ARHGEF18Q6ZSZ5 1173 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 ECHDC2Q86YB7 292 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 VTI1AQ96AJ9 217 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 RTFDC1Q9BY42 306 aaPredicted RBP12.1□□□□□ -0.47
GINS3-202ENST00000328514 CDC42EP4Q9H3Q1 356 aaKnown RBP12.1□□□□□ -0.47
GINS3-202ENST00000328514 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 TMOD4Q9NZQ9 345 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 GGT7Q9UJ14 662 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 DNAJC12Q9UKB3 198 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 MTUS1Q9ULD2 1270 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 STK38LQ9Y2H1 464 aa12.1□□□□□ -0.47
GINS3-202ENST00000328514 RTCBQ9Y3I0 505 aaKnown RBP12.1□□□□□ -0.47
GINS3-202ENST00000328514 TRAFD1O14545 582 aaPredicted RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 TBX3O15119 743 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 PPP1R11O60927 126 aaPredicted RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 PEX11AO75192 247 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 SNUPNO95149 360 aaKnown RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 NEFHP12036 1026 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 ABCB4P21439 1286 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 TNFAIP3P21580 790 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 FMO5P49326 533 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 MPP2Q14168 576 aa12.09□□□□□ -0.47
GINS3-202ENST00000328514 CTTNQ14247 550 aaKnown RBP12.09□□□□□ -0.47
GINS3-202ENST00000328514 LRRC14Q15048 493 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 343.3 ms