RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 SEC63Q9UGP8 760 aaKnown RBP13.74□□□□□ -0.21
CCDC60-201ENST00000327554 TTLL1O95922 423 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 PLA2G4BP0C869 781 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 TARSP26639 723 aaKnown RBP13.73□□□□□ -0.21
CCDC60-201ENST00000327554 ATP5DP30049 168 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 STX2P32856 288 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 STAT1P42224 750 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 POLGP54098 1239 aaPredicted RBP13.73□□□□□ -0.21
CCDC60-201ENST00000327554 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 INTS8Q75QN2 995 aaKnown RBP13.73□□□□□ -0.21
CCDC60-201ENST00000327554 CYFIP1Q7L576 1253 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 PHC3Q8NDX5 983 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 TTC8Q8TAM2 541 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 GRAMD1AQ96CP6 724 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 SLC7A6OSQ96CW6 309 aaPredicted RBP13.73□□□□□ -0.21
CCDC60-201ENST00000327554 ERP27Q96DN0 273 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 THAP2Q9H0W7 228 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 HAO1Q9UJM8 370 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 CHKBQ9Y259 395 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 ALG6Q9Y672 507 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 NAV1Q8NEY1 1877 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 FAM170AA1A519 330 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 T-ENOLP0DO92 83 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 SOX5P35711 763 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 LAMB3Q13751 1172 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 TSNAXIP1Q2TAA8 658 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 ARSHQ5FYA8 562 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 WASHC2DQ5SRD0 308 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 FOXB2Q5VYV0 432 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 SH3TC2Q8TF17 1288 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 UCMAQ8WVF2 138 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 C7orf43Q8WVR3 580 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 TBC1D10AQ9BXI6 508 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 TAS2R14Q9NYV8 317 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 RGL1Q9NZL6 768 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 DLGAP2Q9P1A6 1054 aa13.73□□□□□ -0.21
CCDC60-201ENST00000327554 TCRBV7S2A1N4TA0A589 114 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 SIGLEC16A6NMB1 481 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 H0Y3Z8 333 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 RASA1P20936 1047 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 RXRBP28702 533 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 YARSP54577 528 aaKnown RBP13.72□□□□□ -0.21
CCDC60-201ENST00000327554 TCERG1LQ5VWI1 586 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 IRGCQ6NXR0 463 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 LONP2Q86WA8 852 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 VSIG1Q86XK7 387 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 CYP4X1Q8N118 509 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 ZNF333Q96JL9 665 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 EPAS1Q99814 870 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 GORASP1Q9BQQ3 440 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 KIAA1683Q9H0B3 1180 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 TAOK3Q9H2K8 898 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 KIAA1024Q9UPX6 916 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 USP20Q9Y2K6 914 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 A0A1B0GVG6 124 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 NTSR2O95665 410 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 KLRK1P26718 216 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 EPHB2P29323 1055 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 COILP38432 576 aaPredicted RBP13.72□□□□□ -0.21
CCDC60-201ENST00000327554 CASP4P49662 377 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 CTTNQ14247 550 aaKnown RBP13.72□□□□□ -0.21
CCDC60-201ENST00000327554 FBXO33Q7Z6M2 555 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
CCDC60-201ENST00000327554 EZH1Q92800 747 aaPredicted RBP13.72□□□□□ -0.21
CCDC60-201ENST00000327554 KIFAP3Q92845 792 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 ZSWIM1Q9BR11 485 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 NT5C3AQ9H0P0 336 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 DENND2DQ9H6A0 471 aaPredicted RBP13.72□□□□□ -0.21
CCDC60-201ENST00000327554 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCDC60-201ENST00000327554 PTPN22Q9Y2R2 807 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 MROH7Q68CQ1 1323 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
CCDC60-201ENST00000327554 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 MIF4GDA9UHW6 222 aaKnown RBP13.71□□□□□ -0.21
CCDC60-201ENST00000327554 POTECB2RU33 542 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 ENTPD5O75356 428 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 GGPS1O95749 300 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 HADHBP55084 474 aaKnown RBP13.71□□□□□ -0.21
CCDC60-201ENST00000327554 SIX1Q15475 284 aaPredicted RBP13.71□□□□□ -0.21
CCDC60-201ENST00000327554 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.21
CCDC60-201ENST00000327554 ZC3H12AQ5D1E8 599 aaKnown RBP13.71□□□□□ -0.21
CCDC60-201ENST00000327554 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 SEPT14Q6ZU15 432 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 FAM47EQ6ZV65 393 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 EPM2AIP1Q7L775 607 aaPredicted RBP13.71□□□□□ -0.21
CCDC60-201ENST00000327554 FAM210AQ96ND0 272 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 PITPNM3Q9BZ71 974 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 TRIM4Q9C037 500 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 NMRK1Q9NWW6 199 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 ADGRA3Q8IWK6 1321 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 PASKQ96RG2 1323 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 GTPBP10A4D1E9 387 aaKnown RBP13.71□□□□□ -0.21
CCDC60-201ENST00000327554 CETPP11597 493 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 SMARCA1P28370 1054 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 CHKAP35790 457 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 KCNJ1P48048 391 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 ADCY7P51828 1080 aa13.71□□□□□ -0.21
CCDC60-201ENST00000327554 STRN3Q13033 797 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms