RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 OLFML3Q9NRN5 406 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 HAUS2Q9NVX0 235 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 WRAP73Q9P2S5 460 aaPredicted RBP13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 DDX20Q9UHI6 824 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 MRPL11Q9Y3B7 192 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 STK24Q9Y6E0 443 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 MOXD1Q6UVY6 613 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 SPATS2Q86XZ4 545 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 TBC1D31Q96DN5 1066 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 AGBL1Q96MI9 1066 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 HEMGNQ9BXL5 484 aa13.89□□□□□ -0.19
HMGCS1-201ENST00000325110 H0YIN7 160 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 NPEPPSP55786 919 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 GPC5P78333 572 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 IFI35P80217 286 aaPredicted RBP13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 NLGN1Q8N2Q7 840 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 TCP11Q8WWU5 503 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 NUP85Q9BW27 656 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 COG5Q9UP83 839 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 MYH7BA7E2Y1 1941 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 CLTAP09496 248 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 PLA2G4FQ68DD2 849 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 LDHDQ86WU2 507 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 RHOT2Q8IXI1 618 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 GIMAP7Q8NHV1 300 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 HES6Q96HZ4 224 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 HSD17B14Q9BPX1 270 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 AFF2P51816 1311 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 DLEC1Q9Y238 1755 aa13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 DDX60LQ5H9U9 1706 aaKnown RBP13.88□□□□□ -0.19
HMGCS1-201ENST00000325110 CLDN3O15551 220 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 ECHS1P30084 290 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 PPP3CAQ08209 521 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 XXYLT1Q8NBI6 393 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 GDAP1Q8TB36 358 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 ZNF564Q8TBZ8 553 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 MASTLQ96GX5 879 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 CARD9Q9H257 536 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 TMEM59LQ9UK28 342 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 TNRC6CQ9HCJ0 1690 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 RASGRF2O14827 1237 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 JAM2P57087 298 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 DLGAP5Q15398 846 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 LONRF1Q17RB8 773 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 SGO2Q562F6 1265 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 DCAF12L1Q5VU92 463 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 HIBCHQ6NVY1 386 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 FOXR2Q6PJQ5 311 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 CD302Q8IX05 232 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 CCDC197Q8NCU1 140 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 DHX38Q92620 1227 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 THOC1Q96FV9 657 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 PI4K2AQ9BTU6 479 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 EIF3DO15371 548 aaKnown RBP eCLIP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 PTENP60484 403 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 MAPK7Q13164 816 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 RRP1BQ14684 758 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 INTS8Q75QN2 995 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 GSTA5Q7RTV2 222 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 SLC47A2Q86VL8 602 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 ATG4AQ8WYN0 398 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 ADAM33Q9BZ11 813 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 TOPORSQ9NS56 1045 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 HSPBP1Q9NZL4 362 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 SYNGAP1Q96PV0 1343 aa13.87□□□□□ -0.19
HMGCS1-201ENST00000325110 TCRBV7S2A1N4TA0A589 114 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 OPLAHO14841 1288 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 PDE6CP51160 858 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 SOX10P56693 466 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 CBWD2Q8IUF1 395 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 TAB3Q8N5C8 712 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 MKL1Q969V6 931 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 CHMP6Q96FZ7 201 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 ACCSQ96QU6 501 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 XPO6Q96QU8 1125 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 GLIS2Q9BZE0 524 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 USP20Q9Y2K6 914 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 TRAF1Q13077 416 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 HVCN1Q96D96 273 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 KLC4Q9NSK0 619 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 ANAPC7Q9UJX3 599 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 PYGMP11217 842 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 RPL21P46778 160 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 HP1BP3Q5SSJ5 553 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 STRIP1Q5VSL9 837 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 PASD1Q8IV76 773 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 CDAN1Q8IWY9 1227 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 GMCL1Q96IK5 515 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 SLC40A1Q9NP59 571 aa13.86□□□□□ -0.19
HMGCS1-201ENST00000325110 A0A0A6YYK5 440 aaPredicted RBP13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 C21orf2O43822 256 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 PSMD10O75832 226 aa13.85□□□□□ -0.19
HMGCS1-201ENST00000325110 EIF3BP55884 814 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms