RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TAS1R3Q7RTX0 852 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 LRRC71Q8N4P6 559 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 SPC24Q8NBT2 197 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 KLHDC9Q8NEP7 349 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 CNOT6LQ96LI5 555 aaKnown RBP13.96□□□□□ -0.18
DDX39A-202ENST00000324340 KIFC3Q9BVG8 833 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 NFKBIZQ9BYH8 718 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 SUGCTQ9HAC7 445 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 AGPAT3Q9NRZ7 376 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 DDX20Q9UHI6 824 aaKnown RBP13.96□□□□□ -0.18
DDX39A-202ENST00000324340 FRMPD3Q5JV73 1810 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 PHLPP2Q6ZVD8 1323 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 CETN3O15182 167 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 SLC16A3O15427 465 aaKnown RBP13.95□□□□□ -0.18
DDX39A-202ENST00000324340 ZEB2O60315 1214 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 MSCO60682 206 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 INHAP05111 366 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 GRK4P32298 578 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 EFNA5P52803 228 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 COPB1P53618 953 aaKnown RBP13.95□□□□□ -0.18
DDX39A-202ENST00000324340 IGBP1P78318 339 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 LAMTOR4Q0VGL1 99 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 GNASQ5JWF2 1037 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 FBXO38Q6PIJ6 1188 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 DRC7Q8IY82 874 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 SYCP3Q8IZU3 236 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 DEPTORQ8TB45 409 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 LMBR1Q8WVP7 490 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 EEF2KMTQ96G04 330 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 TUBGCP2Q9BSJ2 902 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 MTG1Q9BT17 334 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-202ENST00000324340 MKNK1Q9BUB5 465 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 IKZF4Q9H2S9 585 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 XPNPEP3Q9NQH7 507 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 SUCLA2Q9P2R7 463 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-202ENST00000324340 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 TSKSQ9UJT2 592 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 TRIM17Q9Y577 477 aa13.95□□□□□ -0.18
DDX39A-202ENST00000324340 SCN10AQ9Y5Y9 1956 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 LRRIQ4A6NIV6 560 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 PGK1P00558 417 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 PIGRP01833 764 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 TMOD1P28289 359 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 PBX1P40424 430 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 CLCN3P51790 818 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 HNRNPH2P55795 449 aaKnown RBP13.94□□□□□ -0.18
DDX39A-202ENST00000324340 TFDP1Q14186 410 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 FILIP1LQ4L180 1135 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 MIIPQ5JXC2 388 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 FRMD5Q7Z6J6 570 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-202ENST00000324340 LRRC8AQ8IWT6 810 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 CCDC113Q9H0I3 377 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 C2orf40Q9H1Z8 148 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 RASSF4Q9H2L5 321 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 SETD4Q9NVD3 440 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 TAB2Q9NYJ8 693 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 PTCH2Q9Y6C5 1203 aa13.94□□□□□ -0.18
DDX39A-202ENST00000324340 LGALS16A8MUM7 142 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 N4BP3O15049 544 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 CLIC2O15247 247 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 AKAP3O75969 853 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 MCCD1P59942 119 aaPredicted RBP13.93□□□□□ -0.18
DDX39A-202ENST00000324340 MAN2A1Q16706 1144 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 NFRKBQ6P4R8 1299 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 RHPN2Q8IUC4 686 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 VSTM4Q8IW00 320 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 METTL13Q8N6R0 699 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 ZBTB10Q96DT7 871 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 UBXN6Q9BZV1 441 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 PTPN22Q9Y2R2 807 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 STYXL1Q9Y6J8 313 aa13.93□□□□□ -0.18
DDX39A-202ENST00000324340 KAT6AQ92794 2004 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 EVPLQ92817 2033 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 SMIM35A0A1B0GVV1 85 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 K7ERI5 159 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 MAPK13O15264 365 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 NRDCO43847 1150 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 ADSSP30520 456 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 MTIF2P46199 727 aaKnown RBP13.92□□□□□ -0.18
DDX39A-202ENST00000324340 PTENP60484 403 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 STRN3Q13033 797 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 HIC1Q14526 733 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 CCDC40Q4G0X9 1142 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 LHX8Q68G74 356 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 SLC39A4Q6P5W5 647 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 SESTD1Q86VW0 696 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 TRIM59Q8IWR1 403 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 KIAA0319LQ8IZA0 1049 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 PCSK9Q8NBP7 692 aaKnown RBP13.92□□□□□ -0.18
DDX39A-202ENST00000324340 RNF149Q8NC42 400 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 CACTINQ8WUQ7 758 aaKnown RBP13.92□□□□□ -0.18
DDX39A-202ENST00000324340 BORCS6Q96GS4 357 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 VPS16Q9H269 839 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 METTL14Q9HCE5 456 aaKnown RBP13.92□□□□□ -0.18
DDX39A-202ENST00000324340 HMX1Q9NP08 348 aaPredicted RBP13.92□□□□□ -0.18
DDX39A-202ENST00000324340 FHOD1Q9Y613 1164 aa13.92□□□□□ -0.18
DDX39A-202ENST00000324340 ITIH6Q6UXX5 1313 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 VGLL3A8MV65 326 aa13.91□□□□□ -0.18
DDX39A-202ENST00000324340 TISP43B9A030 160 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms