RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 SYCE3A1L190 88 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 PRPF6O94906 941 aaKnown RBP23.23■■□□□ 1.31
YBX1-201ENST00000321358 CCDC192P0DO97 292 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 RFC2P35250 354 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 NLRP12P59046 1061 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 LPIN1Q14693 890 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 FAM187BQ17R55 369 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 TRAF7Q6Q0C0 670 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 EPM2AIP1Q7L775 607 aaPredicted RBP23.23■■□□□ 1.31
YBX1-201ENST00000321358 SMYD4Q8IYR2 804 aaPredicted RBP23.23■■□□□ 1.31
YBX1-201ENST00000321358 GUF1Q8N442 669 aaKnown RBP23.23■■□□□ 1.31
YBX1-201ENST00000321358 ZNF507Q8TCN5 953 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 SCFD1Q8WVM8 642 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 STRA6Q9BX79 667 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 FGFBP2Q9BYJ0 223 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 CCDC113Q9H0I3 377 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 GZF1Q9H116 711 aaPredicted RBP23.23■■□□□ 1.31
YBX1-201ENST00000321358 ANO10Q9NW15 660 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 ST3GAL5Q9UNP4 418 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 MAPK8IP1Q9UQF2 711 aa23.23■■□□□ 1.31
YBX1-201ENST00000321358 PPP1R37O75864 691 aa23.22■■□□□ 1.31
YBX1-201ENST00000321358 STX1AQ16623 288 aa23.22■■□□□ 1.31
YBX1-201ENST00000321358 MFSD5Q6N075 450 aa23.22■■□□□ 1.31
YBX1-201ENST00000321358 PPP4R3CPQ6ZMV5 832 aa23.22■■□□□ 1.31
YBX1-201ENST00000321358 FAM43BQ6ZT52 329 aaPredicted RBP23.22■■□□□ 1.31
YBX1-201ENST00000321358 MAP4K3Q8IVH8 894 aa23.22■■□□□ 1.31
YBX1-201ENST00000321358 NELFCDQ8IXH7 590 aa23.22■■□□□ 1.31
YBX1-201ENST00000321358 GLIS3Q8NEA6 775 aa23.22■■□□□ 1.31
YBX1-201ENST00000321358 SCLYQ96I15 445 aa23.22■■□□□ 1.31
YBX1-201ENST00000321358 WNT8AQ9H1J5 351 aa23.22■■□□□ 1.31
YBX1-201ENST00000321358 PSMA7O14818 248 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 HNRNPDLO14979 420 aaKnown RBP23.21■■□□□ 1.31
YBX1-201ENST00000321358 FGFR4P22455 802 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 AXLP30530 894 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 CD52P31358 61 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 PRCPP42785 496 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 LIG4P49917 911 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 KNOP1Q1ED39 458 aaKnown RBP23.21■■□□□ 1.31
YBX1-201ENST00000321358 BMT2Q1RMZ1 405 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 COBLL1Q53SF7 1204 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 HS2ST1Q7LGA3 356 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 FAM228AQ86W67 206 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 IFIH1Q9BYX4 1025 aaKnown RBP23.21■■□□□ 1.31
YBX1-201ENST00000321358 PADI3Q9ULW8 664 aa23.21■■□□□ 1.31
YBX1-201ENST00000321358 ZSCAN20P17040 1043 aaPredicted RBP23.2■■□□□ 1.3
YBX1-201ENST00000321358 BMP6P22004 513 aa23.2■■□□□ 1.3
YBX1-201ENST00000321358 TAS1R3Q7RTX0 852 aa23.2■■□□□ 1.3
YBX1-201ENST00000321358 APBB1IPQ7Z5R6 666 aaPredicted RBP23.2■■□□□ 1.3
YBX1-201ENST00000321358 SEPT8Q92599 483 aa23.2■■□□□ 1.3
YBX1-201ENST00000321358 GBP3Q9H0R5 595 aa23.2■■□□□ 1.3
YBX1-201ENST00000321358 AGO3Q9H9G7 860 aaKnown RBP23.2■■□□□ 1.3
YBX1-201ENST00000321358 TYRO3Q06418 890 aa23.19■■□□□ 1.3
YBX1-201ENST00000321358 MBTPS1Q14703 1052 aa23.19■■□□□ 1.3
YBX1-201ENST00000321358 NOTUMQ6P988 496 aa23.19■■□□□ 1.3
YBX1-201ENST00000321358 ZPBP2Q6X784 338 aa23.19■■□□□ 1.3
YBX1-201ENST00000321358 RPUSD2Q8IZ73 545 aaKnown RBP23.19■■□□□ 1.3
YBX1-201ENST00000321358 ADSSL1Q8N142 457 aa23.19■■□□□ 1.3
YBX1-201ENST00000321358 GOLGA5Q8TBA6 731 aa23.19■■□□□ 1.3
YBX1-201ENST00000321358 DHTKD1Q96HY7 919 aaPredicted RBP23.19■■□□□ 1.3
YBX1-201ENST00000321358 LBHD1Q9BQE6 289 aaPredicted RBP23.19■■□□□ 1.3
YBX1-201ENST00000321358 TCHPQ9BT92 498 aa23.19■■□□□ 1.3
YBX1-201ENST00000321358 TARS2Q9BW92 718 aaKnown RBP23.19■■□□□ 1.3
YBX1-201ENST00000321358 CHST12Q9NRB3 414 aa23.19■■□□□ 1.3
YBX1-201ENST00000321358 PIN4Q9Y237 131 aaKnown RBP23.19■■□□□ 1.3
YBX1-201ENST00000321358 CNTNAP2Q9UHC6 1331 aa23.19■■□□□ 1.3
YBX1-201ENST00000321358 TSPAN1O60635 241 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 NBNO60934 754 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 MATR3P43243 847 aaKnown RBP eCLIP23.18■■□□□ 1.3
YBX1-201ENST00000321358 KCNA1Q09470 495 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 ATF7IP2Q5U623 682 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 KLHL10Q6JEL2 608 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 DEFB128Q7Z7B8 93 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 APBB2Q92870 758 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 ADPGKQ9BRR6 497 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 ERVK-5Q9HDB9 667 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 AGPAT5Q9NUQ2 364 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 CGNQ9P2M7 1197 aaKnown RBP23.18■■□□□ 1.3
YBX1-201ENST00000321358 ARF4P18085 180 aaPredicted RBP23.18■■□□□ 1.3
YBX1-201ENST00000321358 SNRPFP62306 86 aaKnown RBP23.18■■□□□ 1.3
YBX1-201ENST00000321358 AMHR2Q16671 573 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 DPCR1Q3MIW9 517 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 CT47A1Q5JQC4 288 aaPredicted RBP23.18■■□□□ 1.3
YBX1-201ENST00000321358 SLFN12LQ6IEE8 588 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 ACO2Q99798 780 aaKnown RBP23.18■■□□□ 1.3
YBX1-201ENST00000321358 TSG101Q99816 390 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 FTHL17Q9BXU8 183 aa23.18■■□□□ 1.3
YBX1-201ENST00000321358 NAT10Q9H0A0 1025 aaKnown RBP23.18■■□□□ 1.3
YBX1-201ENST00000321358 N4BP3O15049 544 aa23.17■■□□□ 1.3
YBX1-201ENST00000321358 B4GALT5O43286 388 aa23.17■■□□□ 1.3
YBX1-201ENST00000321358 TOM1L1O75674 476 aa23.17■■□□□ 1.3
YBX1-201ENST00000321358 PIGRP01833 764 aa23.17■■□□□ 1.3
YBX1-201ENST00000321358 CXCL10P02778 98 aa23.17■■□□□ 1.3
YBX1-201ENST00000321358 PFKMP08237 780 aa23.17■■□□□ 1.3
YBX1-201ENST00000321358 ITGB8P26012 769 aa23.17■■□□□ 1.3
YBX1-201ENST00000321358 CCDC51Q96ER9 411 aa23.17■■□□□ 1.3
YBX1-201ENST00000321358 TYW1Q9NV66 732 aaKnown RBP23.17■■□□□ 1.3
YBX1-201ENST00000321358 ZMYND8Q9ULU4 1186 aaPredicted RBP23.17■■□□□ 1.3
YBX1-201ENST00000321358 TNFSF13BQ9Y275 285 aa23.17■■□□□ 1.3
YBX1-201ENST00000321358 A0A1B0GUA9 196 aa23.16■■□□□ 1.3
YBX1-201ENST00000321358 BICDL2A1A5D9 508 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms