RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 HIP1RO75146 1068 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 GGPS1O95749 300 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 SHBGP04278 402 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 BCRP11274 1271 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 CTNNA2P26232 953 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 PEX5P50542 639 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 PMS2P54278 862 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 IFFO1Q0D2I5 559 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 ZNF211Q13398 564 aaPredicted RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 LACTB2Q53H82 288 aaPredicted RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 C1orf220Q5T0J3 134 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 ERMARDQ5T6L9 678 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 CCDC121Q6ZUS5 278 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 INTS8Q75QN2 995 aaKnown RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 FBXO25Q8TCJ0 367 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 P3H4Q92791 437 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 CD101Q93033 1021 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 RNF25Q96BH1 459 aaPredicted RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 HOOK2Q96ED9 719 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 XPO6Q96QU8 1125 aaKnown RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 LXNQ9BS40 222 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 TMEM109Q9BVC6 243 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 FAM129AQ9BZQ8 928 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 RANBP17Q9H2T7 1088 aaKnown RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 ADAM7Q9H2U9 754 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 YY1AP1Q9H869 796 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 A1CFQ9NQ94 594 aaKnown RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 TMOD4Q9NZQ9 345 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 CNOT7Q9UIV1 285 aaKnown RBP9.4□□□□□ -0.91
CLK1-201ENST00000321356 RASAL2Q9UJF2 1139 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 RPTORQ8N122 1335 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 LRRN2O75325 713 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 FTLP02792 175 aaPredicted RBP9.39□□□□□ -0.91
CLK1-201ENST00000321356 ARP10275 920 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 MMP13P45452 471 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 MARCKSL1P49006 195 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 RBM5P52756 815 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLK1-201ENST00000321356 PLTPP55058 493 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 GPC5P78333 572 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 DLG4P78352 724 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 PPP3CAQ08209 521 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 ALCAMQ13740 583 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 CYP1B1Q16678 543 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 ANKRD20A8PQ5CZ79 823 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 TTC27Q6P3X3 843 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 ADAT2Q7Z6V5 191 aaKnown RBP9.39□□□□□ -0.91
CLK1-201ENST00000321356 ARHGEF19Q8IW93 802 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 ZDHHC14Q8IZN3 488 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 CACNA2D3Q8IZS8 1091 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 SPICE1Q8N0Z3 855 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 UBL4BQ8N7F7 174 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 MORC4Q8TE76 937 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 KRT35Q92764 455 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 MASTLQ96GX5 879 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 ZNF317Q96PQ6 595 aaPredicted RBP9.39□□□□□ -0.91
CLK1-201ENST00000321356 RIT2Q99578 217 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 ZNF577Q9BSK1 485 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 DEFB129Q9H1M3 183 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 EHMT1Q9H9B1 1298 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 UBE2TQ9NPD8 197 aaPredicted RBP9.39□□□□□ -0.91
CLK1-201ENST00000321356 NOCTQ9UK39 431 aaKnown RBP9.39□□□□□ -0.91
CLK1-201ENST00000321356 TMX2Q9Y320 296 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 EMSYQ7Z589 1322 aa9.39□□□□□ -0.91
CLK1-201ENST00000321356 ZNFX1Q9P2E3 1918 aaKnown RBP9.39□□□□□ -0.91
CLK1-201ENST00000321356 ARHGEF35A5YM69 484 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 CCDC169A6NNP5 214 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 IPO5O00410 1097 aaKnown RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 DNM1LO00429 736 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 PODXLO00592 558 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 MAPK13O15264 365 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 ECE2O60344 883 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 PLA2G6O60733 806 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 ABCB7O75027 752 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 RTN2O75298 545 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 GZMAP12544 262 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 KRT13P13646 458 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 CHRNB2P17787 502 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 PDE6BP35913 854 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 ECE1P42892 770 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 RPL21P46778 160 aaKnown RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 VAMP7P51809 220 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 CDR1P51861 262 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 SPRED3Q2MJR0 410 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 TNFAIP8L3Q5GJ75 292 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 GKAP1Q5VSY0 366 aaPredicted RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 DENND2CQ68D51 928 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 AADACL2Q6P093 401 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 CROCCP2Q86T23 111 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 SYCP3Q8IZU3 236 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 NLGN1Q8N2Q7 840 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 MDM1Q8TC05 714 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 EPS8L1Q8TE68 723 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 ATXN2LQ8WWM7 1075 aaKnown RBP9.38□□□□□ -0.91
CLK1-201ENST00000321356 C18orf8Q96DM3 657 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 CHMP6Q96FZ7 201 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 TEKT3Q9BXF9 490 aa9.38□□□□□ -0.91
CLK1-201ENST00000321356 TMX4Q9H1E5 349 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms