RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 NOVA2Q9UNW9 492 aaKnown RBP18.82■□□□□ 0.6
COL9A1-201ENST00000320755 MYO1FO00160 1098 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 CYP26A1O43174 497 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 SORBS3O60504 671 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 QARSP47897 775 aaKnown RBP18.81■□□□□ 0.6
COL9A1-201ENST00000320755 PLTPP55058 493 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 SOX10P56693 466 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 KRT71Q3SY84 523 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 B3GNT9Q6UX72 402 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 SUPT20HQ8NEM7 779 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 TAAR1Q96RJ0 339 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 NCANO14594 1321 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 UBE4BO95155 1302 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 SMIM23A6NLE4 172 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 DCDC2CA8MYV0 355 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 H0YGN5 161 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 DHX15O43143 795 aaKnown RBP18.81■□□□□ 0.6
COL9A1-201ENST00000320755 YWHABP31946 246 aaKnown RBP18.81■□□□□ 0.6
COL9A1-201ENST00000320755 MDH1P40925 334 aaKnown RBP18.81■□□□□ 0.6
COL9A1-201ENST00000320755 MRPS9P82933 396 aaKnown RBP18.81■□□□□ 0.6
COL9A1-201ENST00000320755 SP4Q02446 784 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 CBWD2Q8IUF1 395 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 UHMK1Q8TAS1 419 aaKnown RBP18.81■□□□□ 0.6
COL9A1-201ENST00000320755 PDGFDQ9GZP0 370 aaPredicted RBP18.81■□□□□ 0.6
COL9A1-201ENST00000320755 NFS1Q9Y697 457 aa18.81■□□□□ 0.6
COL9A1-201ENST00000320755 ZNF536O15090 1300 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 ATP9AO75110 1047 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 CALCAP01258 141 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 ICAM1P05362 532 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 XKR9Q5GH70 373 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 NSMFQ6X4W1 530 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 PACS2Q86VP3 889 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 GOLGA6L10A0A0M3HER8 536 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 TESPA1A2RU30 521 aaPredicted RBP18.8■□□□□ 0.6
COL9A1-201ENST00000320755 MXI1P50539 228 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 KIF22Q14807 665 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 TMC3Q7Z5M5 1100 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 C18orf8Q96DM3 657 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 PCDHB18PQ96TA0 734 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 STRA6Q9BX79 667 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 TMEM206Q9H813 350 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 DAAM1Q9Y4D1 1078 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 PLS3P13797 630 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 HMGB2P26583 209 aaKnown RBP18.8■□□□□ 0.6
COL9A1-201ENST00000320755 SLC47A2Q86VL8 602 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 PPM1EQ8WY54 764 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 FMO2Q99518 471 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 EPN3Q9H201 632 aa18.8■□□□□ 0.6
COL9A1-201ENST00000320755 AGO4Q9HCK5 861 aaKnown RBP18.8■□□□□ 0.6
COL9A1-201ENST00000320755 TLDC2A0PJX2 215 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 PTGISQ16647 500 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 TTC31Q49AM3 519 aaPredicted RBP18.79■□□□□ 0.6
COL9A1-201ENST00000320755 C1orf220Q5T0J3 134 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 PHLDB2Q86SQ0 1253 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 SLC9A9Q8IVB4 645 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 TMEM117Q9H0C3 514 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 TOPORSQ9NS56 1045 aaPredicted RBP18.79■□□□□ 0.6
COL9A1-201ENST00000320755 SYNPO2Q9UMS6 1093 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 CTDP1Q9Y5B0 961 aaPredicted RBP18.79■□□□□ 0.6
COL9A1-201ENST00000320755 ADRB2P07550 413 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 ASNSP08243 561 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 EFCAB13Q8IY85 973 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 PRPF38AQ8NAV1 312 aaKnown RBP18.79■□□□□ 0.6
COL9A1-201ENST00000320755 CLEC4DQ8WXI8 215 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 CCT8L2Q96SF2 557 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 CARD9Q9H257 536 aa18.79■□□□□ 0.6
COL9A1-201ENST00000320755 ANKRD63C9JTQ0 380 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 COMTP21964 271 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 MUTP22033 750 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 PTGER2P43116 358 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 HSD17B4P51659 736 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 MAGOHP61326 146 aaKnown RBP18.78■□□□□ 0.6
COL9A1-201ENST00000320755 RPS6P62753 249 aaKnown RBP18.78■□□□□ 0.6
COL9A1-201ENST00000320755 GPC5P78333 572 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 SF3A3Q12874 501 aaKnown RBP eCLIP18.78■□□□□ 0.6
COL9A1-201ENST00000320755 TADA2BQ86TJ2 420 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 NOP9Q86U38 636 aaKnown RBP18.78■□□□□ 0.6
COL9A1-201ENST00000320755 BBXQ8WY36 941 aaPredicted RBP18.78■□□□□ 0.6
COL9A1-201ENST00000320755 MAGOHBQ96A72 148 aaKnown RBP18.78■□□□□ 0.6
COL9A1-201ENST00000320755 FAM114A2Q9NRY5 505 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 PTPN22Q9Y2R2 807 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 PTENP60484 403 aa18.78■□□□□ 0.6
COL9A1-201ENST00000320755 POU5F1Q01860 360 aaKnown RBP18.78■□□□□ 0.6
COL9A1-201ENST00000320755 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.78■□□□□ 0.6
COL9A1-201ENST00000320755 MMEP08473 750 aa18.77■□□□□ 0.6
COL9A1-201ENST00000320755 EPC2Q52LR7 807 aa18.77■□□□□ 0.6
COL9A1-201ENST00000320755 RNF187Q5TA31 235 aaPredicted RBP18.77■□□□□ 0.6
COL9A1-201ENST00000320755 LRIG3Q6UXM1 1119 aa18.77■□□□□ 0.6
COL9A1-201ENST00000320755 NLRP14Q86W24 1093 aa18.77■□□□□ 0.6
COL9A1-201ENST00000320755 SYTL5Q8TDW5 730 aaPredicted RBP18.77■□□□□ 0.6
COL9A1-201ENST00000320755 SEMA4DQ92854 862 aa18.77■□□□□ 0.6
COL9A1-201ENST00000320755 RAB17Q9H0T7 212 aa18.77■□□□□ 0.6
COL9A1-201ENST00000320755 A0A087WUV0 522 aaPredicted RBP18.77■□□□□ 0.6
COL9A1-201ENST00000320755 DLATP10515 647 aaKnown RBP18.77■□□□□ 0.6
COL9A1-201ENST00000320755 RUFY4Q6ZNE9 571 aa18.77■□□□□ 0.6
COL9A1-201ENST00000320755 RHOT2Q8IXI1 618 aa18.77■□□□□ 0.6
COL9A1-201ENST00000320755 ZNF473Q8WTR7 871 aaKnown RBP18.77■□□□□ 0.6
COL9A1-201ENST00000320755 DHX38Q92620 1227 aaKnown RBP18.77■□□□□ 0.6
COL9A1-201ENST00000320755 GMLQ99445 158 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms