RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 EMC2Q15006 297 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 NAB2Q15742 525 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 GPR162Q16538 588 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 SEZ6Q53EL9 994 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 CC2D1AQ6P1N0 951 aaPredicted RBP12.37□□□□□ -0.43
SCG2-201ENST00000305409 INTS8Q75QN2 995 aaKnown RBP12.37□□□□□ -0.43
SCG2-201ENST00000305409 CREG2Q8IUH2 290 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 MAP4K3Q8IVH8 894 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 FBXO16Q8IX29 292 aaPredicted RBP12.37□□□□□ -0.43
SCG2-201ENST00000305409 RDM1Q8NG50 284 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 ASAP3Q8TDY4 903 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 SLC20A1Q8WUM9 679 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 SEMA4DQ92854 862 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 ZBTB45Q96K62 511 aaPredicted RBP12.37□□□□□ -0.43
SCG2-201ENST00000305409 OSBPL9Q96SU4 736 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 PDLIM7Q9NR12 457 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 ARGLU1Q9NWB6 273 aaPredicted RBP12.37□□□□□ -0.43
SCG2-201ENST00000305409 LRRIQ4A6NIV6 560 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 DGAT1O75907 488 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 FARP2O94887 1054 aaPredicted RBP12.37□□□□□ -0.43
SCG2-201ENST00000305409 MOGSQ13724 837 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 XKR3Q5GH77 459 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 KIFAP3Q92845 792 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 FAM213AQ9BRX8 229 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 PI4K2AQ9BTU6 479 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 STK33Q9BYT3 514 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 PORCNQ9H237 461 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 EFCC1Q9HA90 598 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 HYOU1Q9Y4L1 999 aa12.37□□□□□ -0.43
SCG2-201ENST00000305409 OATP04181 439 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 HARSP12081 509 aaKnown RBP12.36□□□□□ -0.43
SCG2-201ENST00000305409 WNT7BP56706 349 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 HSDL1Q3SXM5 330 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 GJC2Q5T442 439 aaPredicted RBP12.36□□□□□ -0.43
SCG2-201ENST00000305409 GSPT2Q8IYD1 628 aaKnown RBP12.36□□□□□ -0.43
SCG2-201ENST00000305409 GDAP1L1Q96MZ0 367 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 PDGFCQ9NRA1 345 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 AGTPBP1Q9UPW5 1226 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 DICER1Q9UPY3 1922 aaKnown RBP12.36□□□□□ -0.43
SCG2-201ENST00000305409 GRID2IPA4D2P6 1211 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 LRRIQ3A6PVS8 624 aaPredicted RBP12.36□□□□□ -0.43
SCG2-201ENST00000305409 TCF7P36402 384 aaPredicted RBP12.36□□□□□ -0.43
SCG2-201ENST00000305409 ACOT2P49753 483 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 MXI1P50539 228 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 ALCAMQ13740 583 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 TUBB2AQ13885 445 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 TAF3Q5VWG9 929 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 GPAT2Q6NUI2 795 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 PPM1KQ8N3J5 372 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 PROCA1Q8NCQ7 364 aaPredicted RBP12.36□□□□□ -0.43
SCG2-201ENST00000305409 OLIG1Q8TAK6 271 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 IFT74Q96LB3 600 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 FGD4Q96M96 766 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 TUBB2BQ9BVA1 445 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 ABCB6Q9NP58 842 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
SCG2-201ENST00000305409 MAFBQ9Y5Q3 323 aaPredicted RBP12.36□□□□□ -0.43
SCG2-201ENST00000305409 IGSF9BQ9UPX0 1349 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 LCTP09848 1927 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 ANO9A1A5B4 782 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 ZRANB2O95218 330 aaKnown RBP eCLIP12.35□□□□□ -0.43
SCG2-201ENST00000305409 EDN1P05305 212 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 GLRA2P23416 452 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 PRKCIP41743 596 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 ZBTB41Q5SVQ8 909 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 MCPH1Q8NEM0 835 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 TAS1R2Q8TE23 839 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 HDAC7Q8WUI4 952 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 TRAPPC12Q8WVT3 735 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 ST6GALNAC4Q9H4F1 302 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 OGFRQ9NZT2 677 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 SOCS7O14512 581 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 CXCL11O14625 94 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 STAM2O75886 525 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 TBC1D8O95759 1140 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 GJB1P08034 283 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 FERP16591 822 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 ICAM3P32942 547 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 STAT5BP51692 787 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 SLC7A5Q01650 507 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 SCARA3Q6AZY7 606 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 USP50Q70EL3 339 aaPredicted RBP12.35□□□□□ -0.43
SCG2-201ENST00000305409 LRRC71Q8N4P6 559 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 GLG1Q92896 1179 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 TIPINQ9BVW5 301 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 TAF1DQ9H5J8 278 aaPredicted RBP12.35□□□□□ -0.43
SCG2-201ENST00000305409 OSGEPQ9NPF4 335 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 ANKFY1Q9P2R3 1169 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 FBXL5Q9UKA1 691 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 EXOC7Q9UPT5 735 aa12.35□□□□□ -0.43
SCG2-201ENST00000305409 WDR90Q96KV7 1748 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 GALCP54803 685 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 LONRF2Q1L5Z9 754 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 EPC2Q52LR7 807 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 PARD3BQ8TEW8 1205 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 SPIRE2Q8WWL2 714 aa12.34□□□□□ -0.43
SCG2-201ENST00000305409 DHX38Q92620 1227 aaKnown RBP12.34□□□□□ -0.43
SCG2-201ENST00000305409 SLC10A4Q96EP9 437 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms