RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SUDS3Q9H7L9 328 aaPredicted RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 FBXL5Q9UKA1 691 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 KRT14P02533 472 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 PDIA2Q13087 525 aaKnown RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 LRRC14Q15048 493 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 ZBED8Q8IZ13 594 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 SPDYE1Q8NFV5 336 aaPredicted RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 FSD1LQ9BXM9 530 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 SDC4P31431 198 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 USP11P51784 963 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 HABP4Q5JVS0 413 aaKnown RBP14.84□□□□□ -0.03
PRKCB-201ENST00000303531 COG1Q8WTW3 980 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 FBXO40Q9UH90 709 aa14.84□□□□□ -0.03
PRKCB-201ENST00000303531 FSCBQ5H9T9 825 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 C1orf54Q8WWF1 131 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 PSPC1Q8WXF1 523 aaKnown RBP14.83□□□□□ -0.03
PRKCB-201ENST00000303531 LIMA1Q9UHB6 759 aaKnown RBP14.83□□□□□ -0.03
PRKCB-201ENST00000303531 PLEKHG2Q9H7P9 1386 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 MYO3BQ8WXR4 1341 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 F5H423 210 aaPredicted RBP14.83□□□□□ -0.03
PRKCB-201ENST00000303531 MYBL1P10243 752 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 NOP14P78316 857 aaKnown RBP14.83□□□□□ -0.03
PRKCB-201ENST00000303531 FRMD5Q7Z6J6 570 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 RHPN2Q8IUC4 686 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 NEDD1Q8NHV4 660 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 MORC4Q8TE76 937 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 HPS3Q969F9 1004 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 LRRC37BQ96QE4 947 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 TRIM15Q9C019 465 aa14.83□□□□□ -0.03
PRKCB-201ENST00000303531 MORC2Q9Y6X9 1032 aaPredicted RBP14.83□□□□□ -0.03
PRKCB-201ENST00000303531 TARSL2A2RTX5 802 aaKnown RBP14.83□□□□□ -0.04
PRKCB-201ENST00000303531 KPNA7A9QM74 516 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 HAUS5O94927 633 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 MYL3P08590 195 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 RXRBP28702 533 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 PAPOLAP51003 745 aaKnown RBP14.83□□□□□ -0.04
PRKCB-201ENST00000303531 COPS2P61201 443 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 PSMC5P62195 406 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 GPSM2P81274 684 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 RHOT1Q8IXI2 618 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 ZNF609O15014 1411 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 CREB3O43889 395 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 CIITAP33076 1130 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 VSNL1P62760 191 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 WRNIP1Q96S55 665 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 IRX2Q9BZI1 471 aaPredicted RBP14.83□□□□□ -0.04
PRKCB-201ENST00000303531 AKR1B1P15121 316 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 FMR1Q06787 632 aaKnown RBP eCLIP14.83□□□□□ -0.047e-7■■□□□ 12.7
PRKCB-201ENST00000303531 SLC10A4Q96EP9 437 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 PNMA3Q9UL41 463 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 HUS1O60921 280 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 KRT7P08729 469 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 NBPF9Q3BBW0 867 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 TRIML2Q8N7C3 387 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 SUN2Q9UH99 717 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 AMACRQ9UHK6 382 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 NPHP3-ACAD11A0A0J9YXS1 232 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 ACAD11Q709F0 780 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 GTSE1Q9NYZ3 720 aa14.83□□□□□ -0.04
PRKCB-201ENST00000303531 A0A1B0GTH6 734 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 FAM205CA6NFA0 338 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 NBPF26B4DH59 902 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 NBPF10Q6P3W6 841 aaKnown RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 NBPF15Q8N660 670 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 ALKBH8Q96BT7 664 aaKnown RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 CENPKQ9BS16 269 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 SLC9A2Q9UBY0 812 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 PFASO15067 1338 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 C1orf146Q5VVC0 180 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 CDC42BPBQ9Y5S2 1711 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 ZNF185O15231 689 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 ZNF772Q68DY9 489 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 GIPC2Q8TF65 315 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 LRRC1Q9BTT6 524 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 TRIM9Q9C026 710 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 OLA1Q9NTK5 396 aaKnown RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 CHUKO15111 745 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 NSUN2Q08J23 767 aaKnown RBP eCLIP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 GPD1LQ8N335 351 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 CHP1Q99653 195 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 SSTR3P32745 418 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 CCZ1BP86790 482 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 CCZ1P86791 482 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 RABL6Q3YEC7 729 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 E4F1Q66K89 784 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 ZNF668Q96K58 619 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 RNPC3Q96LT9 517 aaKnown RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 ZBBXA8MT70 800 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 PPARGP37231 505 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 IZUMO3Q5VZ72 239 aa14.82□□□□□ -0.04
PRKCB-201ENST00000303531 ABTB1Q969K4 478 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.82□□□□□ -0.04
PRKCB-201ENST00000303531 USP42Q9H9J4 1324 aaKnown RBP14.81□□□□□ -0.04
PRKCB-201ENST00000303531 QRICH2Q9H0J4 1663 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 ROR1Q01973 937 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 NCAPHQ15003 741 aa14.81□□□□□ -0.04
PRKCB-201ENST00000303531 PHF20Q9BVI0 1012 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms