RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 AFF1P51825 1210 aaKnown RBP20.12■□□□□ 0.81
SPSB3-201ENST00000301717 NAALADL2Q58DX5 795 aa20.12■□□□□ 0.81
SPSB3-201ENST00000301717 ZBTB8OSQ8IWT0 167 aa20.12■□□□□ 0.81
SPSB3-201ENST00000301717 IFT74Q96LB3 600 aa20.12■□□□□ 0.81
SPSB3-201ENST00000301717 TRAIPQ9BWF2 469 aa20.12■□□□□ 0.81
SPSB3-201ENST00000301717 FZD8Q9H461 694 aa20.12■□□□□ 0.81
SPSB3-201ENST00000301717 YEATS4O95619 227 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 PRKCBP05771 671 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 BMPR1AP36894 532 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 GPM6BQ13491 265 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 SPOUT1Q5T280 376 aaKnown RBP20.11■□□□□ 0.81
SPSB3-201ENST00000301717 AGMOQ6ZNB7 445 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 PDILTQ8N807 584 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 SMG8Q8ND04 991 aaKnown RBP20.11■□□□□ 0.81
SPSB3-201ENST00000301717 REEP2Q9BRK0 252 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 APOL6Q9BWW8 343 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 TMEM117Q9H0C3 514 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 INPP5FQ9Y2H2 1132 aa20.11■□□□□ 0.81
SPSB3-201ENST00000301717 MORC2Q9Y6X9 1032 aaPredicted RBP20.11■□□□□ 0.81
SPSB3-201ENST00000301717 GRM6O15303 877 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 SLC16A4O15374 487 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 SLC26A4O43511 780 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 NPTXRO95502 500 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 EEF1DP3Q658K8 133 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 NOTUMQ6P988 496 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 SHC4Q6S5L8 630 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 TAS1R3Q7RTX0 852 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 ABI1Q8IZP0 508 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 LARP4BQ92615 738 aaKnown RBP20.1■□□□□ 0.81
SPSB3-201ENST00000301717 DRC1Q96MC2 740 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 C2orf40Q9H1Z8 148 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 NXF3Q9H4D5 531 aaKnown RBP20.1■□□□□ 0.81
SPSB3-201ENST00000301717 CWH43Q9H720 699 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 ALG13Q9NP73 1137 aaKnown RBP20.1■□□□□ 0.81
SPSB3-201ENST00000301717 PRDM6Q9NQX0 595 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 IPPQ9Y573 584 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 XIRP2A4UGR9 3374 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 FNDC1Q4ZHG4 1894 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-201ENST00000301717 H3BNC9 293 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 ZNF623O75123 536 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 PPP6R2O75170 966 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 EOMESO95936 686 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 PDIA4P13667 645 aaKnown RBP20.1■□□□□ 0.81
SPSB3-201ENST00000301717 PPP2R5AQ15172 486 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 MAPK6Q16659 721 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 AXDND1Q5T1B0 1012 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-201ENST00000301717 RRAGBQ5VZM2 374 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 PPP4R3CPQ6ZMV5 832 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 FAM43BQ6ZT52 329 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-201ENST00000301717 SAMD11Q96NU1 681 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 KMT5AQ9NQR1 393 aa20.1■□□□□ 0.81
SPSB3-201ENST00000301717 PRMT7Q9NVM4 692 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-201ENST00000301717 B4GALT3O60512 393 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 NCLP19338 710 aaKnown RBP20.09■□□□□ 0.81
SPSB3-201ENST00000301717 RAB27AP51159 221 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 DMP1Q13316 513 aaPredicted RBP20.09■□□□□ 0.81
SPSB3-201ENST00000301717 PRPF4BQ13523 1007 aaKnown RBP20.09■□□□□ 0.81
SPSB3-201ENST00000301717 TMEM132AQ24JP5 1023 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 NT5DC1Q5TFE4 455 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 MRPL10Q7Z7H8 261 aaKnown RBP20.09■□□□□ 0.81
SPSB3-201ENST00000301717 KCTD17Q8N5Z5 321 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 KLHL23Q8NBE8 558 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 PDZD7Q9H5P4 517 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 CCDC39Q9UFE4 941 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 PCDHA7Q9UN72 937 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 CNTNAP2Q9UHC6 1331 aa20.09■□□□□ 0.81
SPSB3-201ENST00000301717 A0A1B0GUA9 196 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 HOXA2O43364 376 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 GTPBP6O43824 516 aaPredicted RBP20.08■□□□□ 0.8
SPSB3-201ENST00000301717 OFD1O75665 1012 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 PLS3P13797 630 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 AKAP5P24588 427 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 DNAJB1P25685 340 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 AXLP30530 894 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 DDIT3P35638 169 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 TXLNAP40222 546 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 NCBP1Q09161 790 aaKnown RBP20.08■□□□□ 0.8
SPSB3-201ENST00000301717 GIT2Q14161 759 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 FAM187BQ17R55 369 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 DYMQ7RTS9 669 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 LRRC43Q8N309 656 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 COLGALT1Q8NBJ5 622 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 KIAA1671Q9BY89 1806 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 ZHX3Q9H4I2 956 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 RNF216Q9NWF9 866 aaPredicted RBP20.08■□□□□ 0.8
SPSB3-201ENST00000301717 ARHGAP28Q9P2N2 729 aa20.08■□□□□ 0.8
SPSB3-201ENST00000301717 NLRC5Q86WI3 1866 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 C5orf67F2Z3F1 127 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 K7ERI5 159 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 ACKR2O00590 384 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 CUTAO60888 179 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 ITGB1P05556 798 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 KRT18P05783 430 aaKnown RBP20.07■□□□□ 0.8
SPSB3-201ENST00000301717 STAT6P42226 847 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 ME1P48163 572 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 PCBP1Q15365 356 aaKnown RBP eCLIP20.07■□□□□ 0.8
SPSB3-201ENST00000301717 TPRNQ4KMQ1 711 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 SLC27A1Q6PCB7 646 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 GLB1LQ6UWU2 654 aa20.07■□□□□ 0.8
SPSB3-201ENST00000301717 KCNG4Q8TDN1 519 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms