RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PIGRP01833 764 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 ZNF286BP0CG31 522 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 PON1P27169 355 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 FCGRTP55899 365 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 POLR2FP61218 127 aaKnown RBP17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 LAMTOR4Q0VGL1 99 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 CETN1Q12798 172 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 DRP2Q13474 957 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 TFDP1Q14186 410 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 SLFN12LQ6IEE8 588 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 SLC39A4Q6P5W5 647 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 PDXDC1Q6P996 788 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 ZBTB8OSQ8IWT0 167 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 CCDC170Q8IYT3 715 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 LRRC71Q8N4P6 559 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 BAP1Q92560 729 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 CHP1Q99653 195 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 C2orf40Q9H1Z8 148 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 KIAA1586Q9HCI6 787 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 SUCLA2Q9P2R7 463 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 ADGRG1Q9Y653 693 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 SIP14410 1827 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 ASAP2O43150 1006 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 TRIM49P0CI25 452 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 TRIM49CP0CI26 452 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 ZNF865P0CJ78 1059 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 INSRRP14616 1297 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 SLC9A1P19634 815 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 CYLC1P35663 651 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 VEGFBP49765 207 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 MYL7Q01449 175 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 PRAMEF19Q5SWL8 479 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 EFCAB12Q6NXP0 572 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 GPD1LQ8N335 351 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 METTL13Q8N6R0 699 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 TRAPPC12Q8WVT3 735 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 SYN2Q92777 582 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 FBXL18Q96ME1 805 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 DESI2Q9BSY9 194 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 GANQ9H2C0 597 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 NLRC4Q9NPP4 1024 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 FBXL5Q9UKA1 691 aa17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 EPN1Q9Y6I3 576 aaPredicted RBP17.12■□□□□ 0.33
HERPUD1-201ENST00000300302 DOCK3Q8IZD9 2030 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 GOLGA8IPA6NC78 632 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 GOLGA8JA6NMD2 632 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 P4HA2O15460 535 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 NDUFA10O95299 355 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 C22orf31O95567 290 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 CYP2C19P33261 490 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 ENPEPQ07075 957 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 CCL14Q16627 93 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 KLHDC7AQ5VTJ3 777 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 CDCA2Q69YH5 1023 aaPredicted RBP17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 REXO1L1PQ8IX06 675 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 SAAL1Q96ER3 474 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 GNEQ9Y223 722 aaKnown RBP17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 STYXL1Q9Y6J8 313 aa17.11■□□□□ 0.33
HERPUD1-201ENST00000300302 DYNC1LI2O43237 492 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 IPO7O95373 1038 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 SRGAP2CP0DJJ0 459 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 UCHL3P15374 230 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 TMOD1P28289 359 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 CTGFP29279 349 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 MCCD1P59942 119 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 IGBP1P78318 339 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 SFMBT2Q5VUG0 894 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 RHPN2Q8IUC4 686 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 CBWD2Q8IUF1 395 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 RNF149Q8NC42 400 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 NHEJ1Q9H9Q4 299 aaPredicted RBP17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 DAAM1Q9Y4D1 1078 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 A6NJR5 290 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 ADCY6O43306 1168 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 TBC1D8O95759 1140 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 KLRC1P26715 233 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 MAPK6Q16659 721 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 CBWD6Q4V339 395 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 CBWD3Q5JTY5 395 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 CBWD5Q5RIA9 395 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 TRIM65Q6PJ69 517 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 ZPBP2Q6X784 338 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 TLK2Q86UE8 772 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 TMC2Q8TDI7 906 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 CCDC42Q96M95 316 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 SPAG5Q96R06 1193 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 MYO6Q9UM54 1294 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 Q9Y3F1 56 aa17.1■□□□□ 0.33
HERPUD1-201ENST00000300302 MGAMO43451 1857 aa17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 ZNF233A6NK53 670 aa17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 EXTL3O43909 919 aa17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 LDHAP00338 332 aaKnown RBP17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 ACTN1P12814 892 aa17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 PSMC4P43686 418 aa17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 CPT1AP50416 773 aa17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 DLG4P78352 724 aa17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 KRT83P78385 493 aa17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 ZSWIM2Q8NEG5 633 aa17.09■□□□□ 0.33
HERPUD1-201ENST00000300302 MFSD14AQ96MC6 490 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms