RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PDIK1LQ8N165 341 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 ATP6V1E2Q96A05 226 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 SLC38A7Q9NVC3 462 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 TRIM49P0CI25 452 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 TRIM49CP0CI26 452 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 PPARDQ03181 441 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 NUDCD1Q96RS6 583 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 SMYD2Q9NRG4 433 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 ANKEF1Q9NU02 776 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 BCAP29Q9UHQ4 241 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 LRRC53A6NM62 1247 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 WDR72Q3MJ13 1102 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 BTBD8Q5XKL5 378 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 TTC25Q96NG3 672 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 DEPDC5O75140 1603 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 ZNF500O60304 480 aaPredicted RBP18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 PMLP29590 882 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 PYCARDQ9ULZ3 195 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 MAGED2Q9UNF1 606 aaPredicted RBP18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 AGAP1Q9UPQ3 857 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 TMX2Q9Y320 296 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 FARP1Q9Y4F1 1045 aaPredicted RBP18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 ITGA4P13612 1032 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 MSH2P43246 934 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 CYP4F22Q6NT55 531 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 NUDT18Q6ZVK8 323 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 SH2D3AQ9BRG2 576 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 ATP11AP98196 1134 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 IQCB1Q15051 598 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 SARM1Q6SZW1 724 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 EPB41L5Q9HCM4 733 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 SLC16A3O15427 465 aaKnown RBP18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 GPC4O75487 556 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 TTC30AQ86WT1 665 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 KLHL14Q9P2G3 628 aa18.91■□□□□ 0.62
CDC42EP3-201ENST00000295324 ARHGAP23Q9P227 1491 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 FAM205AQ6ZU69 1335 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 CD4P01730 458 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 SCP2P22307 547 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 STILQ15468 1287 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 EFCAB12Q6NXP0 572 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 MYLK4Q86YV6 388 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 ARHGEF2Q92974 986 aaKnown RBP18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 KAZALD1Q96I82 304 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 RASSF4Q9H2L5 321 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 HSPBP1Q9NZL4 362 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 UPP2O95045 317 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 INPP5BP32019 993 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 CXCR5P32302 372 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 TMEM132DQ14C87 1099 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 GAS2O43903 313 aaKnown RBP18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 MYBL1P10243 752 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 RASSF2P50749 326 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 CC2D1AQ6P1N0 951 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 SPATA2LQ8IUW3 424 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 MCUQ8NE86 351 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 KLC2Q9H0B6 622 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 KLHL8Q9P2G9 620 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 FAM205CA6NFA0 338 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 RPA1P27694 616 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 TROAPQ12815 778 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 EFHC2Q5JST6 749 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 ZNF746Q6NUN9 644 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 TADA2BQ86TJ2 420 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 DPF2Q92785 391 aa18.9■□□□□ 0.62
CDC42EP3-201ENST00000295324 SLMAPQ14BN4 828 aa18.89■□□□□ 0.62
CDC42EP3-201ENST00000295324 YAF2Q8IY57 180 aa18.89■□□□□ 0.62
CDC42EP3-201ENST00000295324 APPL2Q8NEU8 664 aa18.89■□□□□ 0.62
CDC42EP3-201ENST00000295324 REEP2Q9BRK0 252 aa18.89■□□□□ 0.62
CDC42EP3-201ENST00000295324 PPP1R9AQ9ULJ8 1098 aa18.89■□□□□ 0.62
CDC42EP3-201ENST00000295324 SALL1Q9NSC2 1324 aa18.89■□□□□ 0.62
CDC42EP3-201ENST00000295324 CXCL11O14625 94 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 KRT7P08729 469 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 DHX38Q92620 1227 aaKnown RBP18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 GMCL1Q96IK5 515 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 C7orf25Q9BPX7 421 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 PSMD6Q15008 389 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 BBS9Q3SYG4 887 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 KIAA1755Q5JYT7 1200 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 MAP1SQ66K74 1059 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 ARRDC4Q8NCT1 418 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 RRAGCQ9HB90 399 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 MAD2L2Q9UI95 211 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 IQGAP1P46940 1657 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 OAS2P29728 719 aaKnown RBP18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 HOXA10P31260 410 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 NAA25Q14CX7 972 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 EDEM3Q9BZQ6 932 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 MANSC4A6NHS7 340 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 NEMP1O14524 444 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 CLGNO14967 610 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 EPHB4P54760 987 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 SNX9Q9Y5X1 595 aa18.89■□□□□ 0.61
CDC42EP3-201ENST00000295324 CCDC188H7C350 402 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 VPS39Q96JC1 886 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 DDX50Q9BQ39 737 aaKnown RBP18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 ABHD10Q9NUJ1 306 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 IP6K2Q9UHH9 426 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 SYNGAP1Q96PV0 1343 aa18.88■□□□□ 0.61
CDC42EP3-201ENST00000295324 RAD51Q06609 339 aa18.88■□□□□ 0.61
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