RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 SMTNP53814 917 aa16.94■□□□□ 0.3
NCK1-201ENST00000288986 IKBKEQ14164 716 aa16.94■□□□□ 0.3
NCK1-201ENST00000288986 TMEM240Q5SV17 173 aa16.94■□□□□ 0.3
NCK1-201ENST00000288986 SARM1Q6SZW1 724 aa16.94■□□□□ 0.3
NCK1-201ENST00000288986 APBB2Q92870 758 aa16.94■□□□□ 0.3
NCK1-201ENST00000288986 KIFC3Q9BVG8 833 aa16.94■□□□□ 0.3
NCK1-201ENST00000288986 MINDY3Q9H8M7 445 aa16.94■□□□□ 0.3
NCK1-201ENST00000288986 KMT5AQ9NQR1 393 aa16.94■□□□□ 0.3
NCK1-201ENST00000288986 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
NCK1-201ENST00000288986 TANC1Q9C0D5 1861 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 TET1Q8NFU7 2136 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 SMTNL1A8MU46 457 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 BECN2A8MW95 431 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 GOLGA6L19H0YKK7 550 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 RHOBTB3O94955 611 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 CATSPER4Q7RTX7 472 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 ZBTB8OSQ8IWT0 167 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 DNAJC19Q96DA6 116 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 NFKBIZQ9BYH8 718 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 C2orf40Q9H1Z8 148 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 KCNG1Q9UIX4 513 aa16.93■□□□□ 0.3
NCK1-201ENST00000288986 ZBBXA8MT70 800 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 ERCC5P28715 1186 aaPredicted RBP16.92■□□□□ 0.3
NCK1-201ENST00000288986 SHHQ15465 462 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 TCTN1Q2MV58 587 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 C9orf50Q5SZB4 431 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 HSD3B7Q9H2F3 369 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 SLC16A4O15374 487 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 ERLIN2O94905 339 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 ADCY5O95622 1261 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 BMP8BP34820 402 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 ZNF131P52739 623 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 ASIC1P78348 528 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 MYL5Q02045 173 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 ZNF658Q5TYW1 1059 aaPredicted RBP16.92■□□□□ 0.3
NCK1-201ENST00000288986 PRPF38BQ5VTL8 546 aaKnown RBP16.92■□□□□ 0.3
NCK1-201ENST00000288986 MED15Q96RN5 788 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 NTPCRQ9BSD7 190 aaKnown RBP16.92■□□□□ 0.3
NCK1-201ENST00000288986 FTHL17Q9BXU8 183 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 ERVK-5Q9HDB9 667 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 PANK4Q9NVE7 773 aa16.92■□□□□ 0.3
NCK1-201ENST00000288986 PPP1R3GB7ZBB8 358 aa16.91■□□□□ 0.3
NCK1-201ENST00000288986 K7ERI5 159 aa16.91■□□□□ 0.3
NCK1-201ENST00000288986 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
NCK1-201ENST00000288986 ZSCAN20P17040 1043 aaPredicted RBP16.91■□□□□ 0.3
NCK1-201ENST00000288986 MBTD1Q05BQ5 628 aa16.91■□□□□ 0.3
NCK1-201ENST00000288986 NCBP1Q09161 790 aaKnown RBP16.91■□□□□ 0.3
NCK1-201ENST00000288986 KMT5BQ4FZB7 885 aa16.91■□□□□ 0.3
NCK1-201ENST00000288986 HERC4Q5GLZ8 1057 aaPredicted RBP16.91■□□□□ 0.3
NCK1-201ENST00000288986 CDCA2Q69YH5 1023 aaPredicted RBP16.91■□□□□ 0.3
NCK1-201ENST00000288986 IFNLR1Q8IU57 520 aaPredicted RBP16.91■□□□□ 0.3
NCK1-201ENST00000288986 FAM178BQ8IXR5 827 aa16.91■□□□□ 0.3
NCK1-201ENST00000288986 CCDC65Q8IXS2 484 aa16.91■□□□□ 0.3
NCK1-201ENST00000288986 ENOX1Q8TC92 643 aaKnown RBP16.91■□□□□ 0.3
NCK1-201ENST00000288986 ADGRA3Q8IWK6 1321 aa16.91■□□□□ 0.3
NCK1-201ENST00000288986 SIP14410 1827 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 ABHD14A-ACY1A0A1B0GW23 586 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 PVALEFA0A1B0GWK0 134 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 DENND3A2RUS2 1198 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 EFNA5P52803 228 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 MAPK6Q16659 721 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 SPIRE2Q8WWL2 714 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 RNPC3Q96LT9 517 aaKnown RBP16.9■□□□□ 0.3
NCK1-201ENST00000288986 MTIF3Q9H2K0 278 aaKnown RBP16.9■□□□□ 0.3
NCK1-201ENST00000288986 TMX1Q9H3N1 280 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 TBC1D7Q9P0N9 293 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 CXXC1Q9P0U4 656 aaPredicted RBP16.9■□□□□ 0.3
NCK1-201ENST00000288986 PIN4Q9Y237 131 aaKnown RBP16.9■□□□□ 0.3
NCK1-201ENST00000288986 BAIAP3O94812 1187 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 GAP43P17677 238 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 PCBP1Q15365 356 aaKnown RBP eCLIP16.9■□□□□ 0.3
NCK1-201ENST00000288986 SFR1Q86XK3 245 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 HERVK_113Q902F9 699 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
NCK1-201ENST00000288986 MRPL44Q9H9J2 332 aaKnown RBP16.9■□□□□ 0.3
NCK1-201ENST00000288986 ARHGAP28Q9P2N2 729 aa16.9■□□□□ 0.3
NCK1-201ENST00000288986 K7ENM7 598 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 EFCAB14O75071 495 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 KCNJ6P48051 423 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 EHHADHQ08426 723 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 TMEM132AQ24JP5 1023 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 COBLL1Q53SF7 1204 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 HAUS6Q7Z4H7 955 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 TDHQ8IZJ6 230 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 TMEM161BQ8NDZ6 487 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 ADAM2Q99965 735 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 FZD8Q9H461 694 aa16.89■□□□□ 0.29
NCK1-201ENST00000288986 PRMT7Q9NVM4 692 aaPredicted RBP16.89■□□□□ 0.29
NCK1-201ENST00000288986 COLQQ9Y215 455 aaPredicted RBP16.89■□□□□ 0.29
NCK1-201ENST00000288986 ENPP3O14638 875 aa16.88■□□□□ 0.29
NCK1-201ENST00000288986 B4GALT5O43286 388 aa16.88■□□□□ 0.29
NCK1-201ENST00000288986 PRKCBP05771 671 aa16.88■□□□□ 0.29
NCK1-201ENST00000288986 IBSPP21815 317 aaPredicted RBP16.88■□□□□ 0.29
NCK1-201ENST00000288986 NMT1P30419 496 aaKnown RBP16.88■□□□□ 0.29
NCK1-201ENST00000288986 NCKAP1LP55160 1127 aa16.88■□□□□ 0.29
NCK1-201ENST00000288986 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
NCK1-201ENST00000288986 UNC13DQ70J99 1090 aa16.88■□□□□ 0.29
NCK1-201ENST00000288986 RTN4RL1Q86UN2 441 aaPredicted RBP16.88■□□□□ 0.29
NCK1-201ENST00000288986 CHST12Q9NRB3 414 aa16.88■□□□□ 0.29
NCK1-201ENST00000288986 SEL1LQ9UBV2 794 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms