RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 BZW1Q7L1Q6 419 aaKnown RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 RHOT2Q8IXI1 618 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 FAM186BQ8IYM0 893 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 ZNF483Q8TF39 744 aaPredicted RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 SPDL1Q96EA4 605 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 THOC1Q96FV9 657 aaKnown RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 RUNDC3BQ96NL0 473 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 ERP44Q9BS26 406 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 RUSC1Q9BVN2 902 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 DNAJC18Q9H819 358 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 SPATS2LQ9NUQ6 558 aaKnown RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 AMACRQ9UHK6 382 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 IGLV3-22A0A075B6J6 115 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 GOLGA6L10A0A0M3HER8 536 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 ANKRD62A6NC57 917 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 FAM86B1E9PN63 330 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 TTI1O43156 1089 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 FAM86B2P0C5J1 330 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 FLT3P36888 993 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 PRR16Q569H4 304 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 SLFN13Q68D06 897 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 PNMA8AQ86V59 439 aaPredicted RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 SLC35G2Q8TBE7 412 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 U2AF1L4Q8WU68 220 aaKnown RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 ZDHHC15Q96MV8 337 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 FIZ1Q96SL8 496 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 FMO2Q99518 471 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 EIF2AK1Q9BQI3 630 aaKnown RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 IDI2Q9BXS1 227 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 EPB41L4BQ9H329 900 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 PCYOX1Q9UHG3 505 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 SYNGAP1Q96PV0 1343 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 P4HA2O15460 535 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 ALADP13716 330 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 CASP4P49662 377 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 KLRC3Q07444 240 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 DHX9Q08211 1270 aaKnown RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 TNFAIP8L3Q5GJ75 292 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 DCAF17Q5H9S7 520 aaPredicted RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 CDCA2Q69YH5 1023 aaPredicted RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 MDM1Q8TC05 714 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 TEKT1Q969V4 418 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 PABPC3Q9H361 631 aaKnown RBP11.19□□□□□ -0.62
SKA1-201ENST00000285116 HOMER3Q9NSC5 361 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 SAMD15Q9P1V8 674 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 APEX2Q9UBZ4 518 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 PARP2Q9UGN5 583 aa11.19□□□□□ -0.62
SKA1-201ENST00000285116 SKAP2O75563 359 aaPredicted RBP11.18□□□□□ -0.62
SKA1-201ENST00000285116 MMEP08473 750 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 ALAS1P13196 640 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 EEF2P13639 858 aaKnown RBP11.18□□□□□ -0.62
SKA1-201ENST00000285116 VCAM1P19320 739 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 CYP1B1Q16678 543 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 TMEM179Q6ZVK1 233 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 TBC1D1Q86TI0 1168 aaPredicted RBP11.18□□□□□ -0.62
SKA1-201ENST00000285116 FBXO11Q86XK2 927 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 SIAH1Q8IUQ4 282 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 CTNNBL1Q8WYA6 563 aaPredicted RBP11.18□□□□□ -0.62
SKA1-201ENST00000285116 RPS6KC1Q96S38 1066 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 SPDYE3A6NKU9 549 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 LIN7AO14910 233 aaPredicted RBP11.18□□□□□ -0.62
SKA1-201ENST00000285116 MAPK13O15264 365 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 GCNT3O95395 438 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 MAPTP10636 758 aaKnown RBP11.18□□□□□ -0.62
SKA1-201ENST00000285116 CHN1P15882 459 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 CTNNA2P26232 953 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 MMP13P45452 471 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 DR1Q01658 176 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 TRPM8Q7Z2W7 1104 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 C12orf56Q8IXR9 622 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 SLC5A5Q92911 643 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 SAAL1Q96ER3 474 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 SH3GL3Q99963 347 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 BHMT2Q9H2M3 363 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 GOLPH3Q9H4A6 298 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 RASAL2Q9UJF2 1139 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 DNAJC12Q9UKB3 198 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 PNMA2Q9UL42 364 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 ATRNL1Q5VV63 1379 aa11.18□□□□□ -0.62
SKA1-201ENST00000285116 RSPH10B2B2RC85 870 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 PODXLO00592 558 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 PPEF1O14829 653 aaPredicted RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 PHF2O75151 1096 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 FGGP02679 453 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 RSPH10BP0C881 870 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 CHRNA3P32297 505 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 PTGIRP43119 386 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 CACNB3P54284 484 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 MAPK7Q13164 816 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 DRAP1Q14919 205 aaPredicted RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 AGAP11Q8TF27 550 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 NSRP1Q9H0G5 558 aaKnown RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 INTS2Q9H0H0 1204 aaKnown RBP11.17□□□□□ -0.62
SKA1-201ENST00000285116 ZHX3Q9H4I2 956 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 PARVGQ9HBI0 331 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 STK32BQ9NY57 414 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 PPP1R9AQ9ULJ8 1098 aa11.17□□□□□ -0.62
SKA1-201ENST00000285116 L3MBTL1Q9Y468 752 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms