RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 PLAGL2Q9UPG8 496 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 SYNGAP1Q96PV0 1343 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 SERPINB3P29508 390 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 RPS6KA3P51812 740 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 RNASELQ05823 741 aaKnown RBP12.91□□□□□ -0.34
ERBB2-201ENST00000269571 CDKAL1Q5VV42 579 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 ZNF577Q9BSK1 485 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 TRIM55Q9BYV6 548 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 PCDHA6Q9UN73 950 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 CHMP2BQ9UQN3 213 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 ARL2BPQ9Y2Y0 163 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 PCDHA8Q9Y5H6 950 aa12.91□□□□□ -0.34
ERBB2-201ENST00000269571 TMCC1O94876 653 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 NCF2P19878 526 aaPredicted RBP12.9□□□□□ -0.34
ERBB2-201ENST00000269571 TMED10P49755 219 aaKnown RBP12.9□□□□□ -0.34
ERBB2-201ENST00000269571 PASD1Q8IV76 773 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 CCDC124Q96CT7 223 aaKnown RBP12.9□□□□□ -0.34
ERBB2-201ENST00000269571 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 CCSER1Q9C0I3 900 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 SSU72P8A0A1W2PR75 194 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 FAM196BA6NMK8 535 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 HAUS5O94927 633 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 SYF2O95926 243 aaKnown RBP12.9□□□□□ -0.34
ERBB2-201ENST00000269571 C4orf33Q8N1A6 199 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 DCLK2Q8N568 766 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 RMDN2Q96LZ7 410 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
ERBB2-201ENST00000269571 TMEM120BA0PK00 339 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 DMP1Q13316 513 aaPredicted RBP12.9□□□□□ -0.34
ERBB2-201ENST00000269571 KYNUQ16719 465 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 XAB2Q9HCS7 855 aaKnown RBP12.9□□□□□ -0.34
ERBB2-201ENST00000269571 SMYD2Q9NRG4 433 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 BARHL2Q9NY43 387 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 ARHGAP20Q9P2F6 1191 aa12.9□□□□□ -0.34
ERBB2-201ENST00000269571 DDX20Q9UHI6 824 aaKnown RBP12.9□□□□□ -0.34
ERBB2-201ENST00000269571 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 GPC5P78333 572 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 NFIXQ14938 502 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 MDH1BQ5I0G3 518 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 EARS2Q5JPH6 523 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 KAT2BQ92831 832 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 DNAJC7Q99615 494 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 ISCUQ9H1K1 167 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 DEPDC5O75140 1603 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 A0A087X0B3 334 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 HSPA9P38646 679 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 TMPRSS15P98073 1019 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 KRT81Q14533 505 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 C1orf146Q5VVC0 180 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 RFX6Q8HWS3 928 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 MTMR8Q96EF0 704 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 MIF4GDA9UHW6 222 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 UCHL3P15374 230 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 CHRNA3P32297 505 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 MRPS9P82933 396 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 ITPK1Q13572 414 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 HADHQ16836 314 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 SLC35G2Q8TBE7 412 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 RFFLQ8WZ73 363 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 ANO3Q9BYT9 981 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 MROH1Q8NDA8 1641 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 NVLO15381 856 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 STAM2O75886 525 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 BMP3P12645 472 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 ZNF394Q53GI3 561 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 GJB7Q6PEY0 223 aa12.89□□□□□ -0.35
ERBB2-201ENST00000269571 EZH1Q92800 747 aaPredicted RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 MOV10L1Q9BXT6 1211 aaKnown RBP12.89□□□□□ -0.35
ERBB2-201ENST00000269571 PPLO60437 1756 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 CCDC195A0A1B0GUA6 201 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 SPECC1L-ADORA2AF8WAN1 911 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 C21orf2O43822 256 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 FAM200BP0CF97 657 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 CD58P19256 250 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 NAB2Q15742 525 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 CFAP36Q96G28 342 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 CEP95Q96GE4 821 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 CYP4F11Q9HBI6 524 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 SH3GLB2Q9NR46 395 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 SPATA31A1Q5TZJ5 1347 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 PIK3CAP42336 1068 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 PHEXP78562 749 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 LMNB2Q03252 620 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 NUP85Q9BW27 656 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 NOD1Q9Y239 953 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 FAM187AA6NFU0 413 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 TMEM191BP0C7N4 346 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 GAP43P17677 238 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 TAF12Q16514 161 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
ERBB2-201ENST00000269571 JAMLQ86YT9 394 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms