RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MYO3BQ8WXR4 1341 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 SPOPO43791 374 aa14□□□□□ -0.17
SNX1-201ENST00000261889 EXOC3O60645 756 aa14□□□□□ -0.17
SNX1-201ENST00000261889 GJB6O95452 261 aa14□□□□□ -0.17
SNX1-201ENST00000261889 EEF2P13639 858 aaKnown RBP14□□□□□ -0.17
SNX1-201ENST00000261889 HOXA10P31260 410 aaPredicted RBP14□□□□□ -0.17
SNX1-201ENST00000261889 MAP2K1Q02750 393 aaPredicted RBP14□□□□□ -0.17
SNX1-201ENST00000261889 KLRC3Q07444 240 aa14□□□□□ -0.17
SNX1-201ENST00000261889 CNBD1Q8NA66 436 aa14□□□□□ -0.17
SNX1-201ENST00000261889 KIFC3Q9BVG8 833 aa14□□□□□ -0.17
SNX1-201ENST00000261889 ECT2Q9H8V3 914 aa14□□□□□ -0.17
SNX1-201ENST00000261889 IRS2Q9Y4H2 1338 aa14□□□□□ -0.17
SNX1-201ENST00000261889 KIAA0391O15091 583 aaKnown RBP14□□□□□ -0.17
SNX1-201ENST00000261889 TTLL1O95922 423 aa14□□□□□ -0.17
SNX1-201ENST00000261889 SESN3P58005 492 aa14□□□□□ -0.17
SNX1-201ENST00000261889 PSMD2Q13200 908 aa14□□□□□ -0.17
SNX1-201ENST00000261889 CCDC88AQ3V6T2 1871 aa14□□□□□ -0.17
SNX1-201ENST00000261889 ZNF449Q6P9G9 518 aa14□□□□□ -0.17
SNX1-201ENST00000261889 SRRM1Q8IYB3 904 aaKnown RBP14□□□□□ -0.17
SNX1-201ENST00000261889 CYP4X1Q8N118 509 aa14□□□□□ -0.17
SNX1-201ENST00000261889 CERS5Q8N5B7 392 aa14□□□□□ -0.17
SNX1-201ENST00000261889 MIEF2Q96C03 454 aa14□□□□□ -0.17
SNX1-201ENST00000261889 HES6Q96HZ4 224 aa14□□□□□ -0.17
SNX1-201ENST00000261889 ZNF317Q96PQ6 595 aaPredicted RBP14□□□□□ -0.17
SNX1-201ENST00000261889 KIF9Q9HAQ2 790 aa14□□□□□ -0.17
SNX1-201ENST00000261889 ZDHHC18Q9NUE0 388 aa14□□□□□ -0.17
SNX1-201ENST00000261889 ASIC3Q9UHC3 531 aa14□□□□□ -0.17
SNX1-201ENST00000261889 TMEM120BA0PK00 339 aa14□□□□□ -0.17
SNX1-201ENST00000261889 SERPINB2P05120 415 aa14□□□□□ -0.17
SNX1-201ENST00000261889 BIRC3Q13489 604 aa14□□□□□ -0.17
SNX1-201ENST00000261889 SYCP2LQ5T4T6 812 aa14□□□□□ -0.17
SNX1-201ENST00000261889 LMBRD2Q68DH5 695 aaPredicted RBP14□□□□□ -0.17
SNX1-201ENST00000261889 SERPINB13Q9UIV8 391 aa14□□□□□ -0.17
SNX1-201ENST00000261889 STXBP5LQ9Y2K9 1186 aa14□□□□□ -0.17
SNX1-201ENST00000261889 RABGAP1Q9Y3P9 1069 aa14□□□□□ -0.17
SNX1-201ENST00000261889 PSME4Q14997 1843 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 RASGRF2O14827 1237 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 MSH4O15457 936 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 SGPL1O95470 568 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 LDHCP07864 332 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 SOX5P35711 763 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 ZFYVE27Q5T4F4 411 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 TRPM8Q7Z2W7 1104 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 RPUSD2Q8IZ73 545 aaKnown RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 ACSF2Q96CM8 615 aaPredicted RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 ZNF287Q9HBT7 754 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 GRHL1Q9NZI5 618 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 PSEN1P49768 467 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 GSTO1P78417 241 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 POU5F1Q01860 360 aaKnown RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 ODR4Q5SWX8 454 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 LRIG3Q6UXM1 1119 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 RFX8Q6ZV50 586 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 PPM1KQ8N3J5 372 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 HERPUD2Q9BSE4 406 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 INTS2Q9H0H0 1204 aaKnown RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 NT5C3AQ9H0P0 336 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 NUCKS1Q9H1E3 243 aaKnown RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 DBNDD1Q9H9R9 158 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 ALG13Q9NP73 1137 aaKnown RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 TOPORSQ9NS56 1045 aaPredicted RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 SLX4Q8IY92 1834 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 WDR91A4D1P6 747 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 MEIS2O14770 477 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 CYP26A1O43174 497 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 FMO5P49326 533 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 SOX10P56693 466 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 EXOC3L1Q86VI1 746 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 OLIG1Q8TAK6 271 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 SYN2Q92777 582 aaPredicted RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 KLHL29Q96CT2 875 aa13.99□□□□□ -0.17
SNX1-201ENST00000261889 EIF2AK1Q9BQI3 630 aaKnown RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 PABPC3Q9H361 631 aaKnown RBP13.99□□□□□ -0.17
SNX1-201ENST00000261889 PFASO15067 1338 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 GPR75-ASB3A0A0A6YYF3 556 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 CETPP11597 493 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 SHMT1P34896 483 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 MAPK7Q13164 816 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 NBPF20Q3BBV1 942 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 DUPD1Q68J44 220 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 SLC47A2Q86VL8 602 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 RFFLQ8WZ73 363 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 ARHGEF2Q92974 986 aaKnown RBP13.98□□□□□ -0.17
SNX1-201ENST00000261889 PI4K2AQ9BTU6 479 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 CHST7Q9NS84 486 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 SUCLA2Q9P2R7 463 aaPredicted RBP13.98□□□□□ -0.17
SNX1-201ENST00000261889 TTC7AQ9ULT0 858 aaPredicted RBP13.98□□□□□ -0.17
SNX1-201ENST00000261889 FER1L6Q2WGJ9 1857 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 GOLGA6L10A0A0M3HER8 536 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 PPIP5K2O43314 1243 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 PDHA1P08559 390 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 CHRNB2P17787 502 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 CCNHP51946 323 aaPredicted RBP13.98□□□□□ -0.17
SNX1-201ENST00000261889 JAG1P78504 1218 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 YTHDF3Q7Z739 585 aaKnown RBP13.98□□□□□ -0.17
SNX1-201ENST00000261889 ANKS4BQ8N8V4 417 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 HAUS1Q96CS2 278 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 SPDL1Q96EA4 605 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 SAAL1Q96ER3 474 aa13.98□□□□□ -0.17
SNX1-201ENST00000261889 PCDHB18PQ96TA0 734 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms