RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 TRIM58Q8NG06 486 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 HINFPQ9BQA5 517 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 EDEM3Q9BZQ6 932 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 FAM49AQ9H0Q0 323 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 AGO2Q9UKV8 859 aaKnown RBP9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 A0A087X0T9 212 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 KRT19P08727 400 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 FAM228BP0C875 321 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 ZNF286BP0CG31 522 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 PAFAH1B1P43034 410 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 MEA1Q16626 185 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 GLYCTKQ8IVS8 523 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 LRRN4CLQ8ND94 238 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 BAP1Q92560 729 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 NT5C1BQ96P26 610 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 DDX41Q9UJV9 622 aaKnown RBP9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 CDC23Q9UJX2 597 aa9.44□□□□□ -0.9
CALCOCO2-201ENST00000258947 ATAD5Q96QE3 1844 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 GSTTP1A0A1W2PQM5 241 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 FTCDO95954 541 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 PIK3CAP42336 1068 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 GCLCP48506 637 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 GTF2BQ00403 316 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 MAPK6Q16659 721 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 ASAP3Q8TDY4 903 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 AFG1LQ8WV93 481 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 CTNNBL1Q8WYA6 563 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 PI4K2AQ9BTU6 479 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 SMARCAD1Q9H4L7 1026 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 XPNPEP1Q9NQW7 623 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 C1orf112Q9NSG2 853 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 SUCLA2Q9P2R7 463 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 APEX2Q9UBZ4 518 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 REXO2Q9Y3B8 237 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 ZMYM2Q9UBW7 1377 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 SYNGAP1Q96PV0 1343 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 EVI5O60447 810 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 ATP1A1P05023 1023 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 GJB1P08034 283 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 KRT39Q6A163 491 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 NLRP7Q8WX94 980 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 ZBTB45Q96K62 511 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 C17orf75Q9HAS0 396 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 RBAKQ9NYW8 714 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 MYO1AQ9UBC5 1043 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 BZW2Q9Y6E2 419 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 RCCD1A6NED2 376 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 SPDYE4A6NLX3 237 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 DYNC1LI2O43237 492 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 NOL4O94818 638 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 H2AFZP0C0S5 128 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 TMOD1P28289 359 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 MARSP56192 900 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 TFAMQ00059 246 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 PPP3CAQ08209 521 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 CELF3Q5SZQ8 465 aaKnown RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 TMEM63BQ5T3F8 832 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 LDLRAD1Q5T700 205 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 EFCAB12Q6NXP0 572 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 TMCO3Q6UWJ1 677 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 H2AFVQ71UI9 128 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 MAP4K3Q8IVH8 894 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 FIZ1Q96SL8 496 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 MAP7D2Q96T17 732 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 PLEKHA4Q9H4M7 779 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 PDE11AQ9HCR9 933 aa9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO2-201ENST00000258947 DOCK1Q14185 1865 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 NCK2O43639 380 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 GH1P01241 217 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 ADRB2P07550 413 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 TMEM62Q0P6H9 643 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 DRP2Q13474 957 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 TRPC3Q13507 836 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 TFDP1Q14186 410 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 GPAT2Q6NUI2 795 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 FOXR2Q6PJQ5 311 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 DPH6Q7L8W6 267 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 PLEKHH3Q7Z736 793 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 GTF3C2Q8WUA4 911 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 KCND1Q9NSA2 647 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 ERAP1Q9NZ08 941 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 CNMDO75829 334 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 MAPTP10636 758 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 GLRA2P23416 452 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 ICAM3P32942 547 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 SOX5P35711 763 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 RFC5P40937 340 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 ARHGAP25P42331 645 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 SSR1P43307 286 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 NCKAP1LP55160 1127 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 SLC18A3Q16572 532 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 BRDTQ58F21 947 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 PRAMEF19Q5SWL8 479 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 SPRYD7Q5W111 196 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 GPR142Q7Z601 462 aa9.42□□□□□ -0.9
CALCOCO2-201ENST00000258947 OR6J1Q8NGC5 347 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms