RNA–Protein interactions for RNA: ENST00000255674.11

RTTN-201, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 6,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-201ENST00000255674 TKFCQ3LXA3 575 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 ZBTB41Q5SVQ8 909 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 FYB2Q5VWT5 728 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 CASC4Q6P4E1 433 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 RGL4Q8IZJ4 473 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 PDCD7Q8N8D1 485 aaKnown RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 NEK11Q8NG66 645 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 DHX58Q96C10 678 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 RRP36Q96EU6 259 aaKnown RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 MPP4Q96JB8 637 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 GJD4Q96KN9 370 aaPredicted RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 UPF3AQ9H1J1 476 aaKnown RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 NKIRAS1Q9NYS0 192 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 HACD3Q9P035 362 aa3.9□□□□□ -1.79
RTTN-201ENST00000255674 PPARGC1AQ9UBK2 798 aaKnown RBP3.9□□□□□ -1.79
RTTN-201ENST00000255674 NIP7Q9Y221 180 aaKnown RBP eCLIP3.9□□□□□ -1.79
RTTN-201ENST00000255674 KLF18A0A0U1RQI7 1052 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 CALML3P27482 149 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ECHS1P30084 290 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 DNM2P50570 870 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ACVR1Q04771 509 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 MAP7Q14244 749 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 KRT24Q2M2I5 525 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ERFEQ4G0M1 354 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 GPATCH4Q5T3I0 446 aaKnown RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 KRT79Q5XKE5 535 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 DENND2CQ68D51 928 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 SDE2Q6IQ49 451 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 MMGT1Q8N4V1 131 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 GABPB2Q8TAK5 448 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 DDX17Q92841 729 aaKnown RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 GAS2L1Q99501 681 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 EYA3Q99504 573 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 BAG1Q99933 345 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 RGL1Q9NZL6 768 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ARPP21Q9UBL0 812 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 ATRXP46100 2492 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 A6NNZ2 444 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 TCP10L2B9ZVM9 353 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 PSMA7O14818 248 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 SMIM24O75264 130 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 SRGAP2BP0DMP2 458 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 XRCC5P13010 732 aaKnown RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 OSBPP22059 807 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 SREBF1P36956 1147 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 MAGEA12P43365 314 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 TSPY1Q01534 308 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 PTH1RQ03431 593 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 GOLGA8FQ08AF8 430 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 GOLGA8DPQ0D2H9 430 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 TUBB8Q3ZCM7 444 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 PPP1R26Q5T8A7 1209 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 TDRPQ86YL5 185 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 FAM133AQ8N9E0 248 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ATL2Q8NHH9 583 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 TNPO1Q92973 898 aaKnown RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 CAPN10Q9HC96 672 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ZHX1Q9UKY1 873 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 MAGED2Q9UNF1 606 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 MAP3K2Q9Y2U5 619 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 TAF6LQ9Y6J9 622 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 TMEM265A0A087WTH1 108 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 TXNDC9O14530 226 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 CETN3O15182 167 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 LGR5O75473 907 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 RGS20O76081 388 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ADCY5O95622 1261 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 PYGLP06737 847 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 CENPAP49450 140 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 TGFB2P61812 414 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 LACTBP83111 547 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 PPARDQ03181 441 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ADCY1Q08828 1119 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 R3HDM1Q15032 1099 aaKnown RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 RTN1Q16799 776 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 MIIPQ5JXC2 388 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 BSPRYQ5W0U4 402 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 PLEKHA7Q6IQ23 1121 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 TTLL7Q6ZT98 887 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 SRGAP1Q7Z6B7 1085 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 MYLK4Q86YV6 388 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 ZGPATQ8N5A5 531 aaKnown RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 CABLES1Q8TDN4 633 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 GTF3C2Q8WUA4 911 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 CD101Q93033 1021 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 NKD2Q969F2 451 aaPredicted RBP3.89□□□□□ -1.79
RTTN-201ENST00000255674 EXOC4Q96A65 974 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 IFT74Q96LB3 600 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 FAM20AQ96MK3 541 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 NEK1Q96PY6 1258 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 CCDC28BQ9BUN5 200 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 PPP1R12CQ9BZL4 782 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 IRAK3Q9Y616 596 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 CACNA1IQ9P0X4 2223 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 SPOPO43791 374 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 PEX14O75381 377 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ZDHHC11BP0C7U3 371 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 MYL6P60660 151 aa3.89□□□□□ -1.79
RTTN-201ENST00000255674 ETF1P62495 437 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms