RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 NEK1Q96PY6 1258 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 SYNCQ9H7C4 482 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 ELP3Q9H9T3 547 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 ARHGEF10LQ9HCE6 1279 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 FAIMQ9NVQ4 179 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 UBAP1Q9NZ09 502 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 HSFX1Q9UBD0 423 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 ADD3Q9UEY8 706 aaKnown RBP12.72□□□□□ -0.37
CCNA1-201ENST00000255465 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
CCNA1-201ENST00000255465 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 PLAAQ9Y263 795 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 SNCAIPQ9Y6H5 919 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.72□□□□□ -0.37
CCNA1-201ENST00000255465 KANSL1LA0AUZ9 987 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 PDE2AO00408 941 aaPredicted RBP12.72□□□□□ -0.37
CCNA1-201ENST00000255465 AKR1B10O60218 316 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 KRT16P08779 473 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 ADARP55265 1226 aaKnown RBP12.72□□□□□ -0.37
CCNA1-201ENST00000255465 ERVK-24P63145 666 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 ITGA7Q13683 1181 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 MUM1Q2TAK8 710 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 CROCCP3Q8IVE0 287 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 MAP7D3Q8IWC1 876 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 SCUBE1Q8IWY4 988 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 PIGOQ8TEQ8 1089 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 WNK4Q96J92 1243 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 INIPQ9NRY2 104 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 GUCA1BQ9UMX6 200 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 CHMP2BQ9UQN3 213 aa12.72□□□□□ -0.37
CCNA1-201ENST00000255465 PTPRFP10586 1907 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 A0A0U1RQJ8 604 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 GSG1L2A8MUP6 293 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 JAK2O60674 1132 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 CBFA2T3O75081 653 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 GNA14O95837 355 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 POLR3DP05423 398 aaPredicted RBP12.71□□□□□ -0.37
CCNA1-201ENST00000255465 PABPC4LP0CB38 370 aaKnown RBP12.71□□□□□ -0.37
CCNA1-201ENST00000255465 HOXD10P28358 340 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 PLCD1P51178 756 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 CLCN2P51788 898 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 EIF3BP55884 814 aaKnown RBP12.71□□□□□ -0.37
CCNA1-201ENST00000255465 KIF23Q02241 960 aaPredicted RBP12.71□□□□□ -0.37
CCNA1-201ENST00000255465 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.37
CCNA1-201ENST00000255465 LIN52Q52LA3 116 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 CRACR2BQ8N4Y2 399 aaPredicted RBP12.71□□□□□ -0.37
CCNA1-201ENST00000255465 FAM227BQ96M60 508 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 DCLRE1BQ9H816 532 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 DNAJC18Q9H819 358 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 DDX43Q9NXZ2 648 aaKnown RBP12.71□□□□□ -0.37
CCNA1-201ENST00000255465 KIAA1522Q9P206 1035 aaPredicted RBP12.71□□□□□ -0.37
CCNA1-201ENST00000255465 INTUQ9ULD6 942 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 AGAP1Q9UPQ3 857 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 N6AMT1Q9Y5N5 214 aa12.71□□□□□ -0.37
CCNA1-201ENST00000255465 A0A0D9SFI3 127 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 H0YGN5 161 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 MATN2O00339 956 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 PEX11AO75192 247 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 MTRF1O75570 445 aaKnown RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 ZBTB48P10074 688 aaPredicted RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 GNAT2P19087 354 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 HPDP32754 393 aaPredicted RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 CA8P35219 290 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 GJA5P36382 358 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 RGS2P41220 211 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 PDE6CP51160 858 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 GUCY2FP51841 1108 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 SPAG1Q07617 926 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 ZBTB17Q13105 803 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 CAMK2BQ13554 666 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 P3H1Q32P28 736 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 SMUG1Q53HV7 270 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 NOL9Q5SY16 702 aaKnown RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 CCDC122Q5T0U0 273 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 SPATA1Q5VX52 437 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 APTXQ7Z2E3 356 aaKnown RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 TTC39CQ8N584 583 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 CAPZA3Q96KX2 299 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 SIKE1Q9BRV8 207 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 TXLNGQ9NUQ3 528 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 HYOU1Q9Y4L1 999 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 NFS1Q9Y697 457 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 USP17L12C9JPN9 530 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 USP17L21D6R901 530 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 CTNND1O60716 968 aaKnown RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 SUN1O94901 812 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 UBOX5O94941 541 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 ASMTLO95671 621 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 OAS1P00973 400 aaKnown RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 GYPCP04921 128 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 KCNA2P16389 499 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 CYLC1P35663 651 aaPredicted RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 EVX2Q03828 476 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 CUL1Q13616 776 aa12.7□□□□□ -0.38
CCNA1-201ENST00000255465 RRP1BQ14684 758 aaKnown RBP12.7□□□□□ -0.38
CCNA1-201ENST00000255465 ERO1BQ86YB8 467 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms