RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 FAM26FQ5R3K3 315 aa25.1■■□□□ 1.61
APOE-201ENST00000252486 C16orf59Q7L2K0 433 aa25.1■■□□□ 1.61
APOE-201ENST00000252486 ZNF720Q7Z2F6 126 aa25.1■■□□□ 1.61
APOE-201ENST00000252486 CCDC51Q96ER9 411 aa25.1■■□□□ 1.61
APOE-201ENST00000252486 GSDMAQ96QA5 445 aa25.1■■□□□ 1.61
APOE-201ENST00000252486 GTPBP4Q9BZE4 634 aaKnown RBP25.1■■□□□ 1.61
APOE-201ENST00000252486 UBE2OQ9C0C9 1292 aaKnown RBP25.1■■□□□ 1.61
APOE-201ENST00000252486 GTF2BQ00403 316 aa25.09■■□□□ 1.61
APOE-201ENST00000252486 PNOCQ13519 176 aa25.09■■□□□ 1.61
APOE-201ENST00000252486 PRPF4BQ13523 1007 aaKnown RBP25.09■■□□□ 1.61
APOE-201ENST00000252486 AMHR2Q16671 573 aa25.09■■□□□ 1.61
APOE-201ENST00000252486 HERVK_113Q902F9 699 aa25.09■■□□□ 1.61
APOE-201ENST00000252486 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.09■■□□□ 1.61
APOE-201ENST00000252486 MRPL4Q9BYD3 311 aaKnown RBP25.09■■□□□ 1.61
APOE-201ENST00000252486 C1orf112Q9NSG2 853 aa25.09■■□□□ 1.61
APOE-201ENST00000252486 RNF216Q9NWF9 866 aaPredicted RBP25.09■■□□□ 1.61
APOE-201ENST00000252486 CNTNAP2Q9UHC6 1331 aa25.09■■□□□ 1.61
APOE-201ENST00000252486 TSPAN1O60635 241 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 GCNT3O95395 438 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 NMT1P30419 496 aaKnown RBP25.08■■□□□ 1.61
APOE-201ENST00000252486 DSC3Q14574 896 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 KMT5BQ4FZB7 885 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 NOTUMQ6P988 496 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 SMARCE1Q969G3 411 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 TMX1Q9H3N1 280 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 CLSTN2Q9H4D0 955 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 PCDH10Q9P2E7 1040 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 TBX20Q9UMR3 447 aa25.08■■□□□ 1.61
APOE-201ENST00000252486 PIN4Q9Y237 131 aaKnown RBP25.08■■□□□ 1.61
APOE-201ENST00000252486 TET1Q8NFU7 2136 aa25.07■■□□□ 1.6
APOE-201ENST00000252486 EIF3DO15371 548 aaKnown RBP eCLIP25.07■■□□□ 1.6
APOE-201ENST00000252486 RHOBTB3O94955 611 aa25.07■■□□□ 1.6
APOE-201ENST00000252486 APBB1IPQ7Z5R6 666 aaPredicted RBP25.07■■□□□ 1.6
APOE-201ENST00000252486 SPATA20Q8TB22 786 aa25.07■■□□□ 1.6
APOE-201ENST00000252486 GPT2Q8TD30 523 aa25.07■■□□□ 1.6
APOE-201ENST00000252486 STRA6Q9BX79 667 aa25.07■■□□□ 1.6
APOE-201ENST00000252486 TSPYL2Q9H2G4 693 aaPredicted RBP25.07■■□□□ 1.6
APOE-201ENST00000252486 RGS18Q9NS28 235 aa25.07■■□□□ 1.6
APOE-201ENST00000252486 TBC1D7Q9P0N9 293 aa25.07■■□□□ 1.6
APOE-201ENST00000252486 TNRC18O15417 2968 aaPredicted RBP25.07■■□□□ 1.6
APOE-201ENST00000252486 N4BP3O15049 544 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 PPP1R37O75864 691 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 SKIP12755 728 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 ARF4P18085 180 aaPredicted RBP25.06■■□□□ 1.6
APOE-201ENST00000252486 KCNJ6P48051 423 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 TMEM132AQ24JP5 1023 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 ZPBP2Q6X784 338 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 OTOP2Q7RTS6 562 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 TAS1R3Q7RTX0 852 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 ADAM2Q99965 735 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 TRAIPQ9BWF2 469 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 NUP62CLQ9H1M0 184 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 EXOC7Q9UPT5 735 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 PCDHA5Q9Y5H7 936 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 UBE4BO95155 1302 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 PDE4DIPQ5VU43 2346 aa25.06■■□□□ 1.6
APOE-201ENST00000252486 HOXA11P31270 313 aaPredicted RBP25.05■■□□□ 1.6
APOE-201ENST00000252486 TCTN1Q2MV58 587 aa25.05■■□□□ 1.6
APOE-201ENST00000252486 L1TD1Q5T7N2 865 aaKnown RBP25.05■■□□□ 1.6
APOE-201ENST00000252486 TWF2Q6IBS0 349 aaKnown RBP25.05■■□□□ 1.6
APOE-201ENST00000252486 MAP4K3Q8IVH8 894 aa25.05■■□□□ 1.6
APOE-201ENST00000252486 ACCSQ96QU6 501 aa25.05■■□□□ 1.6
APOE-201ENST00000252486 TMEM206Q9H813 350 aa25.05■■□□□ 1.6
APOE-201ENST00000252486 A0A1B0GUA9 196 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 ZBBXA8MT70 800 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 ENPP3O14638 875 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 MGEA5O60502 916 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 KIF20AO95235 890 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 PIGRP01833 764 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 AMHP03971 560 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 ZC2HC1CQ53FD0 456 aaPredicted RBP25.04■■□□□ 1.6
APOE-201ENST00000252486 NT5DC1Q5TFE4 455 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 ATF7IP2Q5U623 682 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 PRPF38BQ5VTL8 546 aaKnown RBP25.04■■□□□ 1.6
APOE-201ENST00000252486 SLC27A1Q6PCB7 646 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 SLC24A5Q71RS6 500 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 ACO2Q99798 780 aaKnown RBP25.04■■□□□ 1.6
APOE-201ENST00000252486 ADPGKQ9BRR6 497 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 TNFSF13BQ9Y275 285 aa25.04■■□□□ 1.6
APOE-201ENST00000252486 MICAL3Q7RTP6 2002 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 B4GALT5O43286 388 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 MYBP10242 640 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 SARSP49591 514 aaKnown RBP25.03■■□□□ 1.6
APOE-201ENST00000252486 RAB27AP51159 221 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 WDR5P61964 334 aaKnown RBP25.03■■□□□ 1.6
APOE-201ENST00000252486 RASIP1Q5U651 963 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 LINC01599Q8WXQ3 324 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 HPS3Q969F9 1004 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 BICD1Q96G01 975 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 CPB2Q96IY4 423 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 SLC39A2Q9NP94 309 aa25.03■■□□□ 1.6
APOE-201ENST00000252486 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.02■■□□□ 1.6
APOE-201ENST00000252486 C9IYK1 514 aa25.02■■□□□ 1.6
APOE-201ENST00000252486 CASP5P51878 434 aa25.02■■□□□ 1.6
APOE-201ENST00000252486 CAMK4Q16566 473 aa25.02■■□□□ 1.6
APOE-201ENST00000252486 EPM2AIP1Q7L775 607 aaPredicted RBP25.02■■□□□ 1.6
APOE-201ENST00000252486 RTN4RL1Q86UN2 441 aaPredicted RBP25.02■■□□□ 1.6
APOE-201ENST00000252486 PHOSPHO2Q8TCD6 241 aa25.02■■□□□ 1.6
APOE-201ENST00000252486 ZNF507Q8TCN5 953 aa25.02■■□□□ 1.6
APOE-201ENST00000252486 RNPC3Q96LT9 517 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms