RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 RARRES1P49788 294 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 TCEAL1Q15170 157 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 SPDYCQ5MJ68 293 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 FMO2Q99518 471 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 PKD2L1Q9P0L9 805 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 CTTNBP2NLQ9P2B4 639 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 NR2E1Q9Y466 385 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 CNTNAP1P78357 1384 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 SYNGAP1Q96PV0 1343 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 MYO1FO00160 1098 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 CPP00450 1065 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 FTLP02792 175 aaPredicted RBP17.73■□□□□ 0.43
HOXD3-201ENST00000249440 CAP2P40123 477 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 QARSP47897 775 aaKnown RBP17.73■□□□□ 0.43
HOXD3-201ENST00000249440 GPC5P78333 572 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 PPP3CAQ08209 521 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 DHX34Q14147 1143 aaKnown RBP17.73■□□□□ 0.43
HOXD3-201ENST00000249440 SPDYE2Q495Y8 402 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 GRIPAP1Q4V328 841 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 EPC2Q52LR7 807 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 AGBL2Q5U5Z8 902 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 C11orf63Q6NUN7 778 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 MICALCLQ6ZW33 695 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 UBL4BQ8N7F7 174 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 AGBL1Q96MI9 1066 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 ERP44Q9BS26 406 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.73■□□□□ 0.43
HOXD3-201ENST00000249440 RPTORQ8N122 1335 aa17.73■□□□□ 0.43
HOXD3-201ENST00000249440 FAM187AA6NFU0 413 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 MAPK13O15264 365 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 DHX15O43143 795 aaKnown RBP17.72■□□□□ 0.43
HOXD3-201ENST00000249440 GCLMP48507 274 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 SNRPFP62306 86 aaKnown RBP17.72■□□□□ 0.43
HOXD3-201ENST00000249440 ODF2Q5BJF6 829 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 MIGA2Q7L4E1 593 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 NLRP14Q86W24 1093 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 ARHGEF19Q8IW93 802 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 MICALL1Q8N3F8 863 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 SLC20A1Q8WUM9 679 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 CBWD1Q9BRT8 395 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 TRIM51Q9BSJ1 452 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 PAGR1Q9BTK6 254 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 VEZTQ9HBM0 779 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 HSPBP1Q9NZL4 362 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 TISP43B9A030 160 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 HSPA6P17066 643 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 ZNF211Q13398 564 aaPredicted RBP17.72■□□□□ 0.43
HOXD3-201ENST00000249440 ADAT2Q7Z6V5 191 aaKnown RBP17.72■□□□□ 0.43
HOXD3-201ENST00000249440 PACS2Q86VP3 889 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 MCF2L2Q86YR7 1114 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
HOXD3-201ENST00000249440 ZNF473Q8WTR7 871 aaKnown RBP17.72■□□□□ 0.43
HOXD3-201ENST00000249440 CCT8L2Q96SF2 557 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 IWS1Q96ST2 819 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 TRIM31Q9BZY9 425 aa17.72■□□□□ 0.43
HOXD3-201ENST00000249440 BCCIPQ9P287 314 aaKnown RBP eCLIP17.72■□□□□ 0.43
HOXD3-201ENST00000249440 RTN2O75298 545 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 PPFIA2O75334 1257 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 KIAA0754O94854 1291 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 FAM107AO95990 144 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 VCAM1P19320 739 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 INPP5BP32019 993 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 EIF3BP55884 814 aaKnown RBP17.71■□□□□ 0.43
HOXD3-201ENST00000249440 GTF2BQ00403 316 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 FKBP1CQ5VVH2 108 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 DUPD1Q68J44 220 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 HAUS6Q7Z4H7 955 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 ALG3Q92685 438 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 ST6GALNAC4Q9H4F1 302 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.71■□□□□ 0.43
HOXD3-201ENST00000249440 RASAL2Q9UJF2 1139 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 E7EVH7 732 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 PMM2O15305 246 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 LYPLA2O95372 231 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 ASNSP08243 561 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 TKFCQ3LXA3 575 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 MYCBPAPQ8TBZ2 947 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 ATP8B4Q8TF62 1192 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 TIPINQ9BVW5 301 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 GLIS2Q9BZE0 524 aaPredicted RBP17.71■□□□□ 0.43
HOXD3-201ENST00000249440 TMEM39BQ9GZU3 492 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 AGO4Q9HCK5 861 aaKnown RBP17.71■□□□□ 0.43
HOXD3-201ENST00000249440 ERVK-5Q9HDB9 667 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 TMOD4Q9NZQ9 345 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 COL20A1Q9P218 1284 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 ATP8A1Q9Y2Q0 1164 aa17.71■□□□□ 0.43
HOXD3-201ENST00000249440 ZNF536O15090 1300 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 FAM170AA1A519 330 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 GZMAP12544 262 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 YWHABP31946 246 aaKnown RBP17.7■□□□□ 0.42
HOXD3-201ENST00000249440 MXI1P50539 228 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 SEC24CP53992 1094 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 DRG2P55039 364 aaKnown RBP17.7■□□□□ 0.42
HOXD3-201ENST00000249440 PPP2R2AP63151 447 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 IFFO1Q0D2I5 559 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 MTMR1Q13613 665 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 PCNX4Q63HM2 1172 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 PRPF38AQ8NAV1 312 aaKnown RBP17.7■□□□□ 0.42
HOXD3-201ENST00000249440 RPS6KC1Q96S38 1066 aa17.7■□□□□ 0.42
HOXD3-201ENST00000249440 TBC1D22BQ9NU19 505 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms