RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ANAPC5Q9UJX4 755 aa9.93□□□□□ -0.82
COL21A1-201ENST00000244728 NWD1Q149M9 1564 aa9.93□□□□□ -0.82
COL21A1-201ENST00000244728 CSPG5O95196 566 aa9.93□□□□□ -0.82
COL21A1-201ENST00000244728 PSAPP07602 524 aa9.93□□□□□ -0.82
COL21A1-201ENST00000244728 ECE1P42892 770 aa9.93□□□□□ -0.82
COL21A1-201ENST00000244728 GALCP54803 685 aa9.93□□□□□ -0.82
COL21A1-201ENST00000244728 NFX1Q12986 1120 aaKnown RBP9.93□□□□□ -0.82
COL21A1-201ENST00000244728 PLCB4Q15147 1175 aa9.93□□□□□ -0.82
COL21A1-201ENST00000244728 GBP5Q96PP8 586 aa9.93□□□□□ -0.82
COL21A1-201ENST00000244728 ETNK1Q9HBU6 452 aa9.93□□□□□ -0.82
COL21A1-201ENST00000244728 CNOT7Q9UIV1 285 aaKnown RBP9.93□□□□□ -0.82
COL21A1-201ENST00000244728 ZNF233A6NK53 670 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 TCP11X1B4DZS4 312 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 VEGFAP15692 232 aaPredicted RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 BFSP1Q12934 665 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 DRAP1Q14919 205 aaPredicted RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 NAALADL2Q58DX5 795 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 CAPRIN2Q6IMN6 1127 aaKnown RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 CENPPQ6IPU0 288 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 MICALL2Q8IY33 904 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 CDHR1Q96JP9 859 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 SYNGAP1Q96PV0 1343 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 MED10Q9BTT4 135 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 DDX20Q9UHI6 824 aaKnown RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 FSBPO95073 299 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 BRAFP15056 766 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 SCP2P22307 547 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 QARSP47897 775 aaKnown RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 KRT81Q14533 505 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 TRPM8Q7Z2W7 1104 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 IRF2BP1Q8IU81 584 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 KIF2BQ8N4N8 673 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 XXYLT1Q8NBI6 393 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 MSTO1Q9BUK6 570 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 NACA2Q9H009 215 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 MAGED2Q9UNF1 606 aaPredicted RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 NUB1Q9Y5A7 615 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 CNTNAP4Q9C0A0 1308 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 H0YCG3 227 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 EVI5O60447 810 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 STAM2O75886 525 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 PDHA1P08559 390 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 P4HA1P13674 534 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 EVX2Q03828 476 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 MKRN4PQ13434 485 aaPredicted RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 BAATQ14032 418 aaPredicted RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 KIAA1755Q5JYT7 1200 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 RHOT2Q8IXI1 618 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 SCYL3Q8IZE3 742 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 KIAA0895Q8NCT3 520 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 NLRP7Q8WX94 980 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 RFFLQ8WZ73 363 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 HAUS1Q96CS2 278 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 CALR3Q96L12 384 aaKnown RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 CALN1Q9BXU9 219 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 RPAP3Q9H6T3 665 aaPredicted RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 RNF181Q9P0P0 153 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 DBR1Q9UK59 544 aaKnown RBP9.92□□□□□ -0.82
COL21A1-201ENST00000244728 ZNRF3Q9ULT6 936 aa9.92□□□□□ -0.82
COL21A1-201ENST00000244728 FAM187AA6NFU0 413 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 WDR64B1ANS9 1081 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 ZC2HC1CQ53FD0 456 aaPredicted RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 CCDC137Q6PK04 289 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 APTXQ7Z2E3 356 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 ARHGAP24Q8N264 748 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 NKX2-3Q8TAU0 364 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 NSMCE1Q8WV22 266 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 AGBL1Q96MI9 1066 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 HEMGNQ9BXL5 484 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 HERC5Q9UII4 1024 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 AGPSO00116 658 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 EPHB6O15197 1021 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 MAN1A1P33908 653 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 ERVK-9P63128 1117 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 PALM2Q8IXS6 379 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 ARMC2Q8NEN0 867 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 NSUN6Q8TEA1 469 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 SPC25Q9HBM1 224 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 MAD2L2Q9UI95 211 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 DIS3Q9Y2L1 958 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 MIF4GDA9UHW6 222 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 H7C0C1 242 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 DPEP1P16444 411 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 ATP5OP48047 213 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 IREB2P48200 963 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 GRIK5Q16478 980 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 LRRC34Q8IZ02 419 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 DDX23Q9BUQ8 820 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 KCNQ5Q9NR82 932 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 SEPT10Q9P0V9 454 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 ZNF70Q9UC06 446 aaPredicted RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 FEM1BQ9UK73 627 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 EXOC1LA0A1B0GW35 172 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 WDR91A4D1P6 747 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 SLC37A4O43826 429 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 BAG2O95816 211 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 CA4P22748 312 aa9.91□□□□□ -0.82
COL21A1-201ENST00000244728 POLR2BP30876 1174 aaKnown RBP9.91□□□□□ -0.82
COL21A1-201ENST00000244728 CHRNA3P32297 505 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms