RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 EXOC1Q9NV70 894 aa16.51■□□□□ 0.23
RPA3-201ENST00000223129 PRMT7Q9NVM4 692 aaPredicted RBP16.51■□□□□ 0.23
RPA3-201ENST00000223129 PIN4Q9Y237 131 aaKnown RBP16.51■□□□□ 0.23
RPA3-201ENST00000223129 ARF4P18085 180 aaPredicted RBP16.5■□□□□ 0.23
RPA3-201ENST00000223129 GTF2BQ00403 316 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 KCNA1Q09470 495 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 IKBKEQ14164 716 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 FAM26FQ5R3K3 315 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 C9orf50Q5SZB4 431 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 LINC01599Q8WXQ3 324 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 APBB2Q92870 758 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 ADAM2Q99965 735 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 UBE2OQ9C0C9 1292 aaKnown RBP16.5■□□□□ 0.23
RPA3-201ENST00000223129 CLSTN2Q9H4D0 955 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 AGPAT5Q9NUQ2 364 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 RANBP2P49792 3224 aaKnown RBP16.5■□□□□ 0.23
RPA3-201ENST00000223129 PHLPP2Q6ZVD8 1323 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 ACKR2O00590 384 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 PRPF6O94906 941 aaKnown RBP16.5■□□□□ 0.23
RPA3-201ENST00000223129 STK4Q13043 487 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 PRPF4BQ13523 1007 aaKnown RBP16.5■□□□□ 0.23
RPA3-201ENST00000223129 FAM187BQ17R55 369 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 NT5DC1Q5TFE4 455 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 ISM2Q6H9L7 571 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 PSRC1Q6PGN9 363 aaPredicted RBP16.5■□□□□ 0.23
RPA3-201ENST00000223129 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 SMARCE1Q969G3 411 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 STRA6Q9BX79 667 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 IKZF4Q9H2S9 585 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 TBX20Q9UMR3 447 aa16.5■□□□□ 0.23
RPA3-201ENST00000223129 ENPP3O14638 875 aa16.49■□□□□ 0.23
RPA3-201ENST00000223129 PPP1R37O75864 691 aa16.49■□□□□ 0.23
RPA3-201ENST00000223129 MBD3O95983 291 aa16.49■□□□□ 0.23
RPA3-201ENST00000223129 ZSCAN20P17040 1043 aaPredicted RBP16.49■□□□□ 0.23
RPA3-201ENST00000223129 IBSPP21815 317 aaPredicted RBP16.49■□□□□ 0.23
RPA3-201ENST00000223129 STRN3Q13033 797 aa16.49■□□□□ 0.23
RPA3-201ENST00000223129 DSC3Q14574 896 aa16.49■□□□□ 0.23
RPA3-201ENST00000223129 SHHQ15465 462 aa16.49■□□□□ 0.23
RPA3-201ENST00000223129 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
RPA3-201ENST00000223129 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
RPA3-201ENST00000223129 PRIMPOLQ96LW4 560 aa16.49■□□□□ 0.23
RPA3-201ENST00000223129 TARS2Q9BW92 718 aaKnown RBP16.49■□□□□ 0.23
RPA3-201ENST00000223129 ST6GALNAC4Q9H4F1 302 aa16.49■□□□□ 0.23
RPA3-201ENST00000223129 CXXC1Q9P0U4 656 aaPredicted RBP16.49■□□□□ 0.23
RPA3-201ENST00000223129 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.48■□□□□ 0.23
RPA3-201ENST00000223129 ZBBXA8MT70 800 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 H0YCG3 227 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 RHOBTB3O94955 611 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 SMC2O95347 1197 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 ACTN1P12814 892 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 SARSP49591 514 aaKnown RBP16.48■□□□□ 0.23
RPA3-201ENST00000223129 PCBP1Q15365 356 aaKnown RBP eCLIP16.48■□□□□ 0.23
RPA3-201ENST00000223129 TMEM132AQ24JP5 1023 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 KIAA0895Q8NCT3 520 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 FTHL17Q9BXU8 183 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 NUP62CLQ9H1M0 184 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 ABHD14A-ACY1A0A1B0GW23 586 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 NCBP1Q09161 790 aaKnown RBP16.48■□□□□ 0.23
RPA3-201ENST00000223129 KCNB1Q14721 858 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 TWF2Q6IBS0 349 aaKnown RBP16.48■□□□□ 0.23
RPA3-201ENST00000223129 CHRDL2Q6WN34 429 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 SLC17A8Q8NDX2 589 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 CCDC47Q96A33 483 aaKnown RBP16.48■□□□□ 0.23
RPA3-201ENST00000223129 CHST12Q9NRB3 414 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 GDAQ9Y2T3 454 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 PCDHB13Q9Y5F0 798 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 MICAL3Q7RTP6 2002 aa16.48■□□□□ 0.23
RPA3-201ENST00000223129 CNTNAP2Q9UHC6 1331 aa16.47■□□□□ 0.23
RPA3-201ENST00000223129 A0A1B0GUA9 196 aa16.47■□□□□ 0.23
RPA3-201ENST00000223129 PSMD2Q13200 908 aa16.47■□□□□ 0.23
RPA3-201ENST00000223129 EEF1DP3Q658K8 133 aa16.47■□□□□ 0.23
RPA3-201ENST00000223129 EPM2AIP1Q7L775 607 aaPredicted RBP16.47■□□□□ 0.23
RPA3-201ENST00000223129 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
RPA3-201ENST00000223129 HERVK_113Q902F9 699 aa16.47■□□□□ 0.23
RPA3-201ENST00000223129 KCNN1Q92952 543 aa16.47■□□□□ 0.23
RPA3-201ENST00000223129 ZBTB45Q96K62 511 aaPredicted RBP16.47■□□□□ 0.23
RPA3-201ENST00000223129 GSDMAQ96QA5 445 aa16.47■□□□□ 0.23
RPA3-201ENST00000223129 ACO2Q99798 780 aaKnown RBP16.47■□□□□ 0.23
RPA3-201ENST00000223129 MRPL4Q9BYD3 311 aaKnown RBP16.47■□□□□ 0.23
RPA3-201ENST00000223129 TSPYL2Q9H2G4 693 aaPredicted RBP16.47■□□□□ 0.23
RPA3-201ENST00000223129 RGS18Q9NS28 235 aa16.47■□□□□ 0.23
RPA3-201ENST00000223129 MAN1B1Q9UKM7 699 aa16.47■□□□□ 0.23
RPA3-201ENST00000223129 BIN1O00499 593 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 AXLP30530 894 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 HOXD13P35453 343 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 WDR5P61964 334 aaKnown RBP16.46■□□□□ 0.23
RPA3-201ENST00000223129 DEFB103AP81534 67 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 NFKBIBQ15653 356 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 UBXN11Q5T124 520 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 L1TD1Q5T7N2 865 aaKnown RBP16.46■□□□□ 0.23
RPA3-201ENST00000223129 ATF7IP2Q5U623 682 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 NOTUMQ6P988 496 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 MAP4K3Q8IVH8 894 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 SMYD4Q8IYR2 804 aaPredicted RBP16.46■□□□□ 0.23
RPA3-201ENST00000223129 SCFD1Q8WVM8 642 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 BICD1Q96G01 975 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 EIF2AQ9BY44 585 aaKnown RBP16.46■□□□□ 0.23
RPA3-201ENST00000223129 PDZD7Q9H5P4 517 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 KIAA1468Q9P260 1216 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 MAPK8IP1Q9UQF2 711 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms