RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 NDUFB10O96000 172 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ITGA4P13612 1032 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ALADP13716 330 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 SLC9A1P19634 815 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 CYP3A7P24462 503 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 SLC12A3P55017 1021 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 TNFAIP8L3Q5GJ75 292 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ADGRF4Q8IZF3 695 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 RBM46Q8TBY0 533 aaKnown RBP17.19■□□□□ 0.34
SF3A2-201ENST00000221494 GMCL1Q96IK5 515 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 MIF4GDA9UHW6 222 aaKnown RBP17.19■□□□□ 0.34
SF3A2-201ENST00000221494 CAND2O75155 1236 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 FGGP02679 453 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 CHN1P15882 459 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 SLC16A2P36021 539 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ZNF268Q14587 947 aaPredicted RBP17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ANGEL2Q5VTE6 544 aaKnown RBP17.19■□□□□ 0.34
SF3A2-201ENST00000221494 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 MFSD5Q6N075 450 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 TAOK1Q7L7X3 1001 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ACER1Q8TDN7 264 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 VTI1AQ96AJ9 217 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ANKRD27Q96NW4 1050 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ROPN1BQ9BZX4 212 aaPredicted RBP17.19■□□□□ 0.34
SF3A2-201ENST00000221494 EPB41L4BQ9H329 900 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ROPN1Q9HAT0 212 aaPredicted RBP17.19■□□□□ 0.34
SF3A2-201ENST00000221494 MTRF1LQ9UGC7 380 aaKnown RBP17.19■□□□□ 0.34
SF3A2-201ENST00000221494 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 ATP8A1Q9Y2Q0 1164 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 DCDC2CA8MYV0 355 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 TBX3O15119 743 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 RFX1P22670 979 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 CHRNA3P32297 505 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 ECE1P42892 770 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 MAPK7Q13164 816 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 KIAA1755Q5JYT7 1200 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 TRPM8Q7Z2W7 1104 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 FGFBP2Q9BYJ0 223 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 KCNMB3Q9NPA1 279 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 PNMA2Q9UL42 364 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 KIAA1024Q9UPX6 916 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 TMX2Q9Y320 296 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 PFASO15067 1338 aa17.18■□□□□ 0.34
SF3A2-201ENST00000221494 RGS16O15492 202 aaPredicted RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 RAD21O60216 631 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 PDE6CP51160 858 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 GALCP54803 685 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 PLS1Q14651 629 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 NBPF12Q5TAG4 269 aaPredicted RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 BANK1Q8NDB2 785 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 ERMNQ8TAM6 284 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 MORC4Q8TE76 937 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 CTNNBL1Q8WYA6 563 aaPredicted RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 MKNK1Q9BUB5 465 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 ADAM7Q9H2U9 754 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 INTS9Q9NV88 658 aaKnown RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 PCYOX1Q9UHG3 505 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 O00370 1275 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 KIAA0391O15091 583 aaKnown RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 SSBP05455 408 aaKnown RBP eCLIP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 ACTN1P12814 892 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 SOX5P35711 763 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 CLNS1AP54105 237 aaKnown RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 PPP1R7Q15435 360 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 ENOX2Q16206 610 aaKnown RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 HIBCHQ6NVY1 386 aaPredicted RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
SF3A2-201ENST00000221494 RHOT2Q8IXI1 618 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 SYT11Q9BT88 431 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 DPH5Q9H2P9 285 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 ARHGEF10LQ9HCE6 1279 aa17.17■□□□□ 0.34
SF3A2-201ENST00000221494 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 E9PMD0 336 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 PPP1R12BO60237 982 aaPredicted RBP17.16■□□□□ 0.34
SF3A2-201ENST00000221494 BUB1BO60566 1050 aaPredicted RBP17.16■□□□□ 0.34
SF3A2-201ENST00000221494 PPP1R11O60927 126 aaPredicted RBP17.16■□□□□ 0.34
SF3A2-201ENST00000221494 PHF2O75151 1096 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 ASNSP08243 561 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 C11orf63Q6NUN7 778 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 JAMLQ86YT9 394 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 SYT2Q8N9I0 419 aaPredicted RBP17.16■□□□□ 0.34
SF3A2-201ENST00000221494 U2AF1L4Q8WU68 220 aaKnown RBP17.16■□□□□ 0.34
SF3A2-201ENST00000221494 SLC35C1Q96A29 364 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 COA7Q96BR5 231 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 STK33Q9BYT3 514 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 HOMER3Q9NSC5 361 aa17.16■□□□□ 0.34
SF3A2-201ENST00000221494 OAS1P00973 400 aaKnown RBP17.15■□□□□ 0.34
SF3A2-201ENST00000221494 GAP43P17677 238 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 CALRP27797 417 aaKnown RBP17.15■□□□□ 0.34
SF3A2-201ENST00000221494 GBP2P32456 591 aaPredicted RBP17.15■□□□□ 0.34
SF3A2-201ENST00000221494 CELF4Q9BZC1 486 aaKnown RBP17.15■□□□□ 0.34
SF3A2-201ENST00000221494 GOLPH3Q9H4A6 298 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 TBC1D7Q9P0N9 293 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.15■□□□□ 0.34
SF3A2-201ENST00000221494 UBE4BO95155 1302 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms