RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 LCP1P13796 627 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 GSPT1P15170 499 aaKnown RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 CAPZA2P47755 286 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 DR1Q01658 176 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 SCARF1Q14162 830 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 QRICH1Q2TAL8 776 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 MGAT5BQ3V5L5 792 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 KRT80Q6KB66 452 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 MRFAP1L1Q96HT8 127 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 STRBPQ96SI9 672 aaKnown RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 SLC38A7Q9NVC3 462 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 MAP3K13O43283 966 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 HMBSP08397 361 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 IRF1P10914 325 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 GNA15P30679 374 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 OR1G1P47890 313 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 ETF1P62495 437 aaKnown RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 FAM102AQ5T9C2 384 aaPredicted RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 UNC13DQ70J99 1090 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 CDKL3Q8IVW4 592 aaPredicted RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 TRIM48Q8IWZ4 208 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 CCDC197Q8NCU1 140 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 TMEM169Q96HH4 297 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 LXNQ9BS40 222 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 MUC3BQ9H195 1237 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 LMBRD1Q9NUN5 540 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 MAN1B1Q9UKM7 699 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 AGO2Q9UKV8 859 aaKnown RBP11.22□□□□□ -0.61
TRPS1-201ENST00000220888 USP6P35125 1406 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 H7C1W4 665 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 COPEO14579 308 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 KRT7P08729 469 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 PYGBP11216 843 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 CRLF3Q8IUI8 442 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 MAML1Q92585 1016 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 LPAR1Q92633 364 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 SEL1LQ9UBV2 794 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 PCDHB6Q9Y5E3 794 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 BICRAQ9NZM4 1560 aa11.22□□□□□ -0.61
TRPS1-201ENST00000220888 POTEMA6NI47 508 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 SPDYE5A6NIY4 337 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 MAGEB2O15479 319 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 MCAMP43121 646 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 ALDH7A1P49419 539 aaKnown RBP11.21□□□□□ -0.61
TRPS1-201ENST00000220888 BCAR1P56945 870 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 COPS2P61201 443 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 SPDYE7PQ495Y7 208 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 ANKRD40Q6AI12 368 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 ACAD11Q709F0 780 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 SLC35F6Q8N357 371 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 NRBF2Q96F24 287 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 ALDH1A2O94788 518 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 ZFXP17010 805 aaPredicted RBP11.21□□□□□ -0.61
TRPS1-201ENST00000220888 SLCO1A2P46721 670 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 CPT1AP50416 773 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 RBBP7Q16576 425 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 KHDRBS2Q5VWX1 349 aaKnown RBP11.21□□□□□ -0.61
TRPS1-201ENST00000220888 GPD1LQ8N335 351 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 CCNYL1Q8N7R7 359 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRPS1-201ENST00000220888 ADGRL3Q9HAR2 1447 aa11.21□□□□□ -0.61
TRPS1-201ENST00000220888 ZSCAN9O15535 394 aaPredicted RBP11.21□□□□□ -0.62
TRPS1-201ENST00000220888 CLTAP09496 248 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 RALBP11234 206 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 VAMP7P51809 220 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 UCMAQ8WVF2 138 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 C6orf203Q9P0P8 240 aaPredicted RBP11.21□□□□□ -0.62
TRPS1-201ENST00000220888 SPATA31A6Q5VVP1 1343 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 GOLGA8MH3BSY2 632 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 KCNA2P16389 499 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 EPHB4P54760 987 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 ADCK5Q3MIX3 580 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 STRIP1Q5VSL9 837 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 WDR75Q8IWA0 830 aaKnown RBP11.21□□□□□ -0.62
TRPS1-201ENST00000220888 ANKRD13AQ8IZ07 590 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 SLC44A5Q8NCS7 719 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 SAYSD1Q9NPB0 183 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 FGFR1OP2Q9NVK5 253 aa11.21□□□□□ -0.62
TRPS1-201ENST00000220888 TCOF1Q13428 1488 aaKnown RBP11.2□□□□□ -0.62
TRPS1-201ENST00000220888 GTPBP10A4D1E9 387 aaKnown RBP11.2□□□□□ -0.62
TRPS1-201ENST00000220888 PKN3Q6P5Z2 889 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 PAGE5Q96GU1 130 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 NHEJ1Q9H9Q4 299 aaPredicted RBP11.2□□□□□ -0.62
TRPS1-201ENST00000220888 CFAP74Q9C0B2 1584 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 TPI1P60174 286 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 KCTD16Q68DU8 428 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 SEPT1Q8WYJ6 367 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 CAPN7Q9Y6W3 813 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 E9PMD0 336 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 PHKG1Q16816 387 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 E4F1Q66K89 784 aaPredicted RBP11.2□□□□□ -0.62
TRPS1-201ENST00000220888 IL31Q6EBC2 164 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 BCAS4Q8TDM0 211 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 RAPGEF5Q92565 580 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 SPATA16Q9BXB7 569 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 MAN1C1Q9NR34 630 aa11.2□□□□□ -0.62
TRPS1-201ENST00000220888 IP6K2Q9UHH9 426 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms