RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 EDIL3O43854 480 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 LRRN2O75325 713 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 MED24O75448 989 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 BTDP43251 543 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 JAM2P57087 298 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 PPATQ06203 517 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 MESDQ14696 234 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 LLGL1Q15334 1064 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 MAEAQ7L5Y9 396 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 ZNF483Q8TF39 744 aaPredicted RBP10.41□□□□□ -0.74
TUBB1-201ENST00000217133 TGS1Q96RS0 853 aaKnown RBP10.41□□□□□ -0.74
TUBB1-201ENST00000217133 REEP2Q9BRK0 252 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 A0A1B0GUL6 1792 aa10.41□□□□□ -0.74
TUBB1-201ENST00000217133 NCANO14594 1321 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ROBO3Q96MS0 1386 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 RREB1Q92766 1687 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 PNMA6FA0A0J9YX94 578 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ANKRD62A6NC57 917 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ALADP13716 330 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 KCNJ1P48048 391 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 SETDB1Q15047 1291 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ARSHQ5FYA8 562 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 SLC10A5Q5PT55 438 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 MIS18BP1Q6P0N0 1132 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 C16orf86Q6ZW13 317 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ZC3H3Q8IXZ2 948 aaKnown RBP10.4□□□□□ -0.74
TUBB1-201ENST00000217133 PRELID2Q8N945 189 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 NAP1L4Q99733 375 aaKnown RBP10.4□□□□□ -0.74
TUBB1-201ENST00000217133 TMEM109Q9BVC6 243 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 OSBPL1AQ9BXW6 950 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 STK33Q9BYT3 514 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ROPN1BQ9BZX4 212 aaPredicted RBP10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ROPN1Q9HAT0 212 aaPredicted RBP10.4□□□□□ -0.74
TUBB1-201ENST00000217133 RXFP1Q9HBX9 757 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ASIC3Q9UHC3 531 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 O00370 1275 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 SPOPO43791 374 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 SMNDC1O75940 238 aaKnown RBP eCLIP10.4□□□□□ -0.74
TUBB1-201ENST00000217133 BRAFP15056 766 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 MKRN4PQ13434 485 aaPredicted RBP10.4□□□□□ -0.74
TUBB1-201ENST00000217133 GIT2Q14161 759 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 HYIQ5T013 277 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 DPY19L2P1Q6NXN4 242 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 RHOT2Q8IXI1 618 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 FITM2Q8N6M3 262 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 KRT35Q92764 455 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ZBTB10Q96DT7 871 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 KCNMB3Q9NPA1 279 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 DNAJC17Q9NVM6 304 aaKnown RBP10.4□□□□□ -0.74
TUBB1-201ENST00000217133 ADAM22Q9P0K1 906 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 CORO1CQ9ULV4 474 aaPredicted RBP10.4□□□□□ -0.74
TUBB1-201ENST00000217133 NENFQ9UMX5 172 aa10.4□□□□□ -0.74
TUBB1-201ENST00000217133 VCAM1P19320 739 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 PSMC2P35998 433 aaKnown RBP10.39□□□□□ -0.75
TUBB1-201ENST00000217133 SLC16A2P36021 539 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 PTGIRP43119 386 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 FAM47EQ6ZV65 393 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 LMNTD2Q8IXW0 634 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 FLAD1Q8NFF5 587 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 CNKSR1Q969H4 720 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 NAF1Q96HR8 494 aaKnown RBP10.39□□□□□ -0.75
TUBB1-201ENST00000217133 DDX23Q9BUQ8 820 aaKnown RBP10.39□□□□□ -0.75
TUBB1-201ENST00000217133 MOV10L1Q9BXT6 1211 aaKnown RBP10.39□□□□□ -0.75
TUBB1-201ENST00000217133 ARHGEF3Q9NR81 526 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 TAS2R14Q9NYV8 317 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 TBK1Q9UHD2 729 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 ATP8B3O60423 1300 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L15C9J2P7 530 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L13C9JLJ4 530 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L11C9JVI0 530 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L18D6R9N7 530 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L22D6RA61 530 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L17D6RBQ6 530 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L19D6RCP7 530 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L20D6RJB6 530 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 SLC16A3O15427 465 aaKnown RBP10.39□□□□□ -0.75
TUBB1-201ENST00000217133 CREB1P16220 341 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 MARCKSL1P49006 195 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 SLC12A3P55017 1021 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 PSMC6P62333 389 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 CYP4A11Q02928 519 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L24Q0WX57 530 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 GALNTL6Q49A17 601 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 USP17L6PQ6QN14 398 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 CEP120Q8N960 986 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 TBC1D16Q8TBP0 767 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 CDC42EP4Q9H3Q1 356 aaKnown RBP10.39□□□□□ -0.75
TUBB1-201ENST00000217133 TXLNGQ9NUQ3 528 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 TAF1P21675 1872 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 SFI1A8K8P3 1242 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 RSPH10B2B2RC85 870 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 FAM13AO94988 1023 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 ECEL1O95672 775 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 RSPH10BP0C881 870 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 PPP4CP60510 307 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 BLMHQ13867 455 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 RBBP5Q15291 538 aaKnown RBP10.39□□□□□ -0.75
TUBB1-201ENST00000217133 GRIK5Q16478 980 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 PRR16Q569H4 304 aa10.39□□□□□ -0.75
TUBB1-201ENST00000217133 TRMT10CQ7L0Y3 403 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms