RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 CLASP2O75122 1294 aaKnown RBP24.65■■□□□ 1.54
VTI1B-201ENST00000216456 LYPLA2O95372 231 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 CXCL14O95715 111 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 POMCP01189 267 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 SPATA31C1P0DKV0 1188 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 RARRES1P49788 294 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 RAB27AP51159 221 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 RNASELQ05823 741 aaKnown RBP24.65■■□□□ 1.54
VTI1B-201ENST00000216456 NBR1Q14596 966 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 SMC1AQ14683 1233 aaKnown RBP24.65■■□□□ 1.54
VTI1B-201ENST00000216456 ZNF174Q15697 407 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 C8orf34Q49A92 452 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 MRPL10Q7Z7H8 261 aaKnown RBP24.65■■□□□ 1.54
VTI1B-201ENST00000216456 CDR2LQ86X02 465 aaPredicted RBP24.65■■□□□ 1.54
VTI1B-201ENST00000216456 TCP11Q8WWU5 503 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 TMEM169Q96HH4 297 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 IGSF21Q96ID5 467 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 POP1Q99575 1024 aaKnown RBP24.65■■□□□ 1.54
VTI1B-201ENST00000216456 HCFC2Q9Y5Z7 792 aa24.65■■□□□ 1.54
VTI1B-201ENST00000216456 PRR33A8MZF0 331 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 LOC730098B7Z3J9 87 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 B4GALT5O43286 388 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 USO1O60763 962 aaKnown RBP24.64■■□□□ 1.54
VTI1B-201ENST00000216456 MED24O75448 989 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 WEE2P0C1S8 567 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 SKIP12755 728 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 GLRA2P23416 452 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 PTENP60484 403 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 TMEM184AQ6ZMB5 413 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 C8orf76Q96K31 380 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 ZBP1Q9H171 429 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 RSAD1Q9HA92 442 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 ANKEF1Q9NU02 776 aa24.64■■□□□ 1.54
VTI1B-201ENST00000216456 INO80B-WBP1J3KQ70 363 aa24.63■■□□□ 1.53
VTI1B-201ENST00000216456 ARL2P36404 184 aa24.63■■□□□ 1.53
VTI1B-201ENST00000216456 MBTD1Q05BQ5 628 aa24.63■■□□□ 1.53
VTI1B-201ENST00000216456 AMHR2Q16671 573 aa24.63■■□□□ 1.53
VTI1B-201ENST00000216456 EXOC8Q8IYI6 725 aa24.63■■□□□ 1.53
VTI1B-201ENST00000216456 C12orf76Q8N812 135 aaPredicted RBP24.63■■□□□ 1.53
VTI1B-201ENST00000216456 PHF7Q9BWX1 381 aaPredicted RBP24.63■■□□□ 1.53
VTI1B-201ENST00000216456 POLR3FQ9H1D9 316 aaPredicted RBP24.63■■□□□ 1.53
VTI1B-201ENST00000216456 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.62■■□□□ 1.53
VTI1B-201ENST00000216456 ASAP2O43150 1006 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 GAS2O43903 313 aaKnown RBP24.62■■□□□ 1.53
VTI1B-201ENST00000216456 ERLIN2O94905 339 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 SSBP05455 408 aaKnown RBP eCLIP24.62■■□□□ 1.53
VTI1B-201ENST00000216456 PLA2G5P39877 138 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 HERC4Q5GLZ8 1057 aaPredicted RBP24.62■■□□□ 1.53
VTI1B-201ENST00000216456 CATSPER3Q86XQ3 398 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 PGBD4Q96DM1 585 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 APOL6Q9BWW8 343 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 POLD4Q9HCU8 107 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 MIOSQ9NXC5 875 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 HCN4Q9Y3Q4 1203 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 IPPQ9Y573 584 aa24.62■■□□□ 1.53
VTI1B-201ENST00000216456 F8W810 466 aa24.61■■□□□ 1.53
VTI1B-201ENST00000216456 DGAT1O75907 488 aa24.61■■□□□ 1.53
VTI1B-201ENST00000216456 EPCAMP16422 314 aa24.61■■□□□ 1.53
VTI1B-201ENST00000216456 POTEGQ6S5H5 508 aa24.61■■□□□ 1.53
VTI1B-201ENST00000216456 HFE2Q6ZVN8 426 aa24.61■■□□□ 1.53
VTI1B-201ENST00000216456 DDX53Q86TM3 631 aaKnown RBP24.61■■□□□ 1.53
VTI1B-201ENST00000216456 USP20Q9Y2K6 914 aa24.61■■□□□ 1.53
VTI1B-201ENST00000216456 ARF4P18085 180 aaPredicted RBP24.6■■□□□ 1.53
VTI1B-201ENST00000216456 NCLP19338 710 aaKnown RBP24.6■■□□□ 1.53
VTI1B-201ENST00000216456 MXD4Q14582 209 aaPredicted RBP24.6■■□□□ 1.53
VTI1B-201ENST00000216456 CBX2Q14781 532 aaPredicted RBP24.6■■□□□ 1.53
VTI1B-201ENST00000216456 SAFBQ15424 915 aaKnown RBP eCLIP24.6■■□□□ 1.53
VTI1B-201ENST00000216456 URGCPQ8TCY9 931 aa24.6■■□□□ 1.53
VTI1B-201ENST00000216456 FAM122AQ96E09 287 aa24.6■■□□□ 1.53
VTI1B-201ENST00000216456 ZFP42Q96MM3 310 aa24.6■■□□□ 1.53
VTI1B-201ENST00000216456 CCDC43Q96MW1 224 aaKnown RBP24.6■■□□□ 1.53
VTI1B-201ENST00000216456 GAD1Q99259 594 aa24.6■■□□□ 1.53
VTI1B-201ENST00000216456 NXF3Q9H4D5 531 aaKnown RBP24.6■■□□□ 1.53
VTI1B-201ENST00000216456 TTLL13PA6NNM8 815 aa24.59■■□□□ 1.53
VTI1B-201ENST00000216456 CTSAP10619 480 aa24.59■■□□□ 1.53
VTI1B-201ENST00000216456 ITGA4P13612 1032 aa24.59■■□□□ 1.53
VTI1B-201ENST00000216456 MLH1P40692 756 aa24.59■■□□□ 1.53
VTI1B-201ENST00000216456 ECM1Q16610 540 aa24.59■■□□□ 1.53
VTI1B-201ENST00000216456 IFNLR1Q8IU57 520 aaPredicted RBP24.59■■□□□ 1.53
VTI1B-201ENST00000216456 FBXO18Q8NFZ0 1043 aa24.59■■□□□ 1.53
VTI1B-201ENST00000216456 PRG3Q9Y2Y8 225 aaPredicted RBP24.59■■□□□ 1.53
VTI1B-201ENST00000216456 WDFY4Q6ZS81 3184 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 NRP1O14786 923 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 OR52Z1P0C646 297 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 SCNN1GP51170 649 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 TFDP1Q14186 410 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 TAS1R1Q7RTX1 841 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 BSNDQ8WZ55 320 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 CASP10Q92851 521 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 LLPHQ9BRT6 129 aaKnown RBP24.58■■□□□ 1.53
VTI1B-201ENST00000216456 CSRNP2Q9H175 543 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 MARCH5Q9NX47 278 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 TECTAO75443 2155 aa24.58■■□□□ 1.53
VTI1B-201ENST00000216456 ARL5CA6NH57 179 aa24.57■■□□□ 1.52
VTI1B-201ENST00000216456 SRGAP2BP0DMP2 458 aa24.57■■□□□ 1.52
VTI1B-201ENST00000216456 AKAP5P24588 427 aa24.57■■□□□ 1.52
VTI1B-201ENST00000216456 PTPN14Q15678 1187 aa24.57■■□□□ 1.52
VTI1B-201ENST00000216456 TTC38Q5R3I4 469 aa24.57■■□□□ 1.52
VTI1B-201ENST00000216456 RARS2Q5T160 578 aaKnown RBP24.57■■□□□ 1.52
VTI1B-201ENST00000216456 NOTUMQ6P988 496 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms