RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SEL1LQ9UBV2 794 aa12.54□□□□□ -0.4
CLN6-217ENST00000636964 A0A1W2PQJ5 194 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 POTEB2H3BUK9 544 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 SLC16A4O15374 487 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 EPB41P11171 864 aaKnown RBP12.53□□□□□ -0.4
CLN6-217ENST00000636964 XRCC5P13010 732 aaKnown RBP12.53□□□□□ -0.4
CLN6-217ENST00000636964 SLC9A1P19634 815 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 GJA5P36382 358 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 ACTR2P61160 394 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 ARID5AQ03989 594 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 MEA1Q16626 185 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 C11orf91Q3C1V1 193 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 GNPTABQ3T906 1256 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 ZNF746Q6NUN9 644 aaPredicted RBP12.53□□□□□ -0.4
CLN6-217ENST00000636964 CCDC60Q8IWA6 550 aaPredicted RBP12.53□□□□□ -0.4
CLN6-217ENST00000636964 FAM71BQ8TC56 605 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 CEP170P1Q96L14 293 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 KIFC3Q9BVG8 833 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 GUCA1BQ9UMX6 200 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 SOWAHBA6NEL2 793 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 SPATA31C2B4DYI2 1134 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 CXCL11O14625 94 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 LYPLA2O95372 231 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 ALDH5A1P51649 535 aaPredicted RBP12.53□□□□□ -0.4
CLN6-217ENST00000636964 FRMD5Q7Z6J6 570 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 MICALL1Q8N3F8 863 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 BAP1Q92560 729 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 CCDC102AQ96A19 550 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 GBP3Q9H0R5 595 aa12.53□□□□□ -0.4
CLN6-217ENST00000636964 RNF40O75150 1001 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 CNMDO75829 334 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 ECEL1O95672 775 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 HS2ST1Q7LGA3 356 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 ARMC9Q7Z3E5 817 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 CEP89Q96ST8 783 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 AGPAT3Q9NRZ7 376 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 ARHGAP20Q9P2F6 1191 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 RBPJLQ9UBG7 517 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 CDC23Q9UJX2 597 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 PLAGL2Q9UPG8 496 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 AGTPBP1Q9UPW5 1226 aa12.52□□□□□ -0.4
CLN6-217ENST00000636964 CCDC169A6NNP5 214 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 ARHGAP25P42331 645 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 STXBP4Q6ZWJ1 553 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 FAM186BQ8IYM0 893 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 CCDC42Q96M95 316 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 SEPT9Q9UHD8 586 aaPredicted RBP12.52□□□□□ -0.41
CLN6-217ENST00000636964 FAM184BQ9ULE4 1060 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 KIF5CO60282 957 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 EIF3JO75822 258 aaKnown RBP12.52□□□□□ -0.41
CLN6-217ENST00000636964 AFPP02771 609 aaKnown RBP12.52□□□□□ -0.41
CLN6-217ENST00000636964 PSAPP07602 524 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 CYP2C8P10632 490 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 PLS3P13797 630 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 HNRNPH1P31943 449 aaKnown RBP12.52□□□□□ -0.41
CLN6-217ENST00000636964 LIG3P49916 1009 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 PPIL2Q13356 520 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 HAUS6Q7Z4H7 955 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 SLC10A4Q96EP9 437 aa12.52□□□□□ -0.41
CLN6-217ENST00000636964 A0A087WUV0 522 aaPredicted RBP12.51□□□□□ -0.41
CLN6-217ENST00000636964 RCCD1A6NED2 376 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 EIF4A3P38919 411 aaKnown RBP12.51□□□□□ -0.41
CLN6-217ENST00000636964 MOGSQ13724 837 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 KIAA1328Q86T90 577 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 SLC35F6Q8N357 371 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 ZSWIM2Q8NEG5 633 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 DNERQ8NFT8 737 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 SLC35C1Q96A29 364 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 IWS1Q96ST2 819 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 FBXO40Q9UH90 709 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 KCNH4Q9UQ05 1017 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 DUSP10Q9Y6W6 482 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 LCTP09848 1927 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 EXOC3O60645 756 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 PPP1R37O75864 691 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 PSMC2P35998 433 aaKnown RBP12.51□□□□□ -0.41
CLN6-217ENST00000636964 FOXD4Q12950 439 aaPredicted RBP12.51□□□□□ -0.41
CLN6-217ENST00000636964 ZNF280DQ6N043 979 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 CDHR1Q96JP9 859 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 STRA6Q9BX79 667 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 PFASO15067 1338 aa12.51□□□□□ -0.41
CLN6-217ENST00000636964 ZNF263O14978 683 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 TRIM49P0CI25 452 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 TRIM49CP0CI26 452 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 CYLC1P35663 651 aaPredicted RBP12.5□□□□□ -0.41
CLN6-217ENST00000636964 PRKCEQ02156 737 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 MTERF2Q49AM1 385 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
CLN6-217ENST00000636964 PDXDC1Q6P996 788 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 ABHD15Q6UXT9 468 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 ATP6V0A1Q93050 837 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 SENP7Q9BQF6 1050 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 LACRTQ9GZZ8 138 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 ANKEF1Q9NU02 776 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 STBD1O95210 358 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 RAPGEF1Q13905 1077 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 EXOC3L4Q17RC7 722 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 CCDC122Q5T0U0 273 aa12.5□□□□□ -0.41
CLN6-217ENST00000636964 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms