RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 PRPF6O94906 941 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 LYPLA2O95372 231 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 TCF7P36402 384 aaPredicted RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 MIS18BP1Q6P0N0 1132 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 TRAPPC11Q7Z392 1133 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 LSM14BQ9BX40 385 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 PARD6BQ9BYG5 372 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 IFIH1Q9BYX4 1025 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 TYW1Q9NV66 732 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 FAM53CQ9NYF3 392 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 IGKV6D-21A0A0A0MT36 114 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 BACH1O14867 736 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 AKR1B10O60218 316 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 USO1O60763 962 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 NOL4O94818 638 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 STBD1O95210 358 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 ZRANB2O95218 330 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 GCNT3O95395 438 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 ATP4AP20648 1035 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 TRIM32Q13049 653 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 BMS1Q14692 1282 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 DUSP28Q4G0W2 176 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 UTP14CQ5TAP6 766 aaKnown RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 C1orf186Q6ZWK4 172 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 FRMD5Q7Z6J6 570 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 C4orf19Q8IY42 314 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 SEPT1Q8WYJ6 367 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 SYN2Q92777 582 aaPredicted RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 LENG1Q96BZ8 264 aaPredicted RBP17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 PCDHA13Q9Y5I0 950 aa17.13■□□□□ 0.33
CHRNA7-212ENST00000636271 CTAGE15A4D2H0 777 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 FKTNO75072 461 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 FAM13AO94988 1023 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 CTAGE8P0CG41 777 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 YWHABP31946 246 aaKnown RBP17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 KCNH2Q12809 1159 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 IQSEC1Q6DN90 963 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 ANO5Q75V66 913 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 CTAGE6Q86UF2 777 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 CTAGE4Q8IX94 777 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 KRT222Q8N1A0 295 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 TRPV1Q8NER1 839 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 POLD4Q9HCU8 107 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 NLRC4Q9NPP4 1024 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 SRRDQ9UH36 339 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 ARMCX3Q9UH62 379 aaPredicted RBP17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 MAFBQ9Y5Q3 323 aaPredicted RBP17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 LOXHD1Q8IVV2 1947 aa17.12■□□□□ 0.33
CHRNA7-212ENST00000636271 IGSF9BQ9UPX0 1349 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 SSU72P8A0A1W2PR75 194 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 ENC1O14682 589 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 GH1P01241 217 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 TFRCP02786 760 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 ATP1A1P05023 1023 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 ELNP15502 786 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 RPL13P26373 211 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 MAP2K1Q02750 393 aaPredicted RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 PAPD7Q5XG87 772 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 TRIM50Q86XT4 487 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 SECISBP2LQ93073 1101 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 CRACR2AQ9BSW2 395 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 ZNF302Q9NR11 478 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 DUSP10Q9Y6W6 482 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 ANO9A1A5B4 782 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 MACROD2A1Z1Q3 448 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 SFI1A8K8P3 1242 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 EIF3DO15371 548 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 NR3C1P04150 777 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 POLR2FP61218 127 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 LAMC2Q13753 1193 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 SFMBT2Q5VUG0 894 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 HGSNATQ68CP4 663 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 PLA2G4FQ68DD2 849 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 AFG1LQ8WV93 481 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 ATP6V0A1Q93050 837 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 GNEQ9Y223 722 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 FHOD1Q9Y613 1164 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 SAR1BQ9Y6B6 198 aa17.11■□□□□ 0.33
CHRNA7-212ENST00000636271 RARRES1P49788 294 aa17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 NPEPPSP55786 919 aa17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 PRKCEQ02156 737 aa17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 ASTE1Q2TB18 679 aaPredicted RBP17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 SLC9C1Q4G0N8 1177 aa17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 MYCT1Q8N699 235 aa17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 EMID1Q96A84 441 aaPredicted RBP17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 PARVGQ9HBI0 331 aa17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 KCND2Q9NZV8 630 aa17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 HDAC6Q9UBN7 1215 aa17.1■□□□□ 0.33
CHRNA7-212ENST00000636271 SLC16A3O15427 465 aaKnown RBP17.09■□□□□ 0.33
CHRNA7-212ENST00000636271 SERPING1P05155 500 aa17.09■□□□□ 0.33
CHRNA7-212ENST00000636271 PNMA6AP0CW24 399 aaPredicted RBP17.09■□□□□ 0.33
CHRNA7-212ENST00000636271 STAT5BP51692 787 aa17.09■□□□□ 0.33
CHRNA7-212ENST00000636271 IRF5Q13568 498 aa17.09■□□□□ 0.33
CHRNA7-212ENST00000636271 TDRD12Q587J7 1177 aaKnown RBP17.09■□□□□ 0.33
CHRNA7-212ENST00000636271 CC2D1AQ6P1N0 951 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms