RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SMYD5Q6GMV2 418 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 IQCEQ6IPM2 695 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 CYFIP1Q7L576 1253 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 ZNF571Q7Z3V5 609 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 CTAGE6Q86UF2 777 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 PNMA8AQ86V59 439 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 NCAPG2Q86XI2 1143 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 CCDC60Q8IWA6 550 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 CTAGE4Q8IX94 777 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 EXOC8Q8IYI6 725 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 MSANTD4Q8NCY6 345 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 SHCBP1Q8NEM2 672 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 SLC30A5Q8TAD4 765 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 TMC2Q8TDI7 906 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 AFAP1L1Q8TED9 768 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 GTF3C2Q8WUA4 911 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 SEPT1Q8WYJ6 367 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 OTUD5Q96G74 571 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 CLMNQ96JQ2 1002 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 IFT74Q96LB3 600 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 NOX5Q96PH1 765 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 SPAG5Q96R06 1193 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 CEP89Q96ST8 783 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 CCDC94Q9BW85 323 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 INTS2Q9H0H0 1204 aaKnown RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 MROH8Q9H579 483 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 TAF1DQ9H5J8 278 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 DHX33Q9H6R0 707 aaKnown RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 ATP6V0A4Q9HBG4 840 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 KIAA1586Q9HCI6 787 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 GPRC5CQ9NQ84 441 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 XPNPEP1Q9NQW7 623 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 ZNF302Q9NR11 478 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 FAM53CQ9NYF3 392 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 HSPBP1Q9NZL4 362 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 GCNT4Q9P109 453 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 RNF14Q9UBS8 474 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.06□□□□□ -1.44
NEK3-211ENST00000629912 TSKSQ9UJT2 592 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 DDX41Q9UJV9 622 aaKnown RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 DNAJC12Q9UKB3 198 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 RAB21Q9UL25 225 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 TFR2Q9UP52 801 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 SLC45A1Q9Y2W3 748 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 COQ4Q9Y3A0 265 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 FHOD1Q9Y613 1164 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 STYXL1Q9Y6J8 313 aa6.06□□□□□ -1.44
NEK3-211ENST00000629912 V9GYY5 206 aaPredicted RBP6.06□□□□□ -1.44
NEK3-211ENST00000629912 A0A0A6YYK5 440 aaPredicted RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 DENND3A2RUS2 1198 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 IQCA1LA6NCM1 817 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 CCDC169A6NNP5 214 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 GRIN3BO60391 1043 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 LGR5O75473 907 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 FARP2O94887 1054 aaPredicted RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 PIGRP01833 764 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 OATP04181 439 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 ATP1A1P05023 1023 aaKnown RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 TCP1P17987 556 aaKnown RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 ADSSP30520 456 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 RFC5P40937 340 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 CLDN10P78369 228 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 MYL7Q01449 175 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 PRKCEQ02156 737 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 PTK2Q05397 1052 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 CKAP4Q07065 602 aaKnown RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 PPP3CAQ08209 521 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 SNAPC2Q13487 334 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 DRAP1Q14919 205 aaPredicted RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 BRD3Q15059 726 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 IFI16Q16666 785 aaKnown RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 Q3C1V9 767 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 CBWD6Q4V339 395 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 TDRD12Q587J7 1177 aaKnown RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 CBWD3Q5JTY5 395 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 CBWD5Q5RIA9 395 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 FAM160B1Q5W0V3 765 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 PHLDB3Q6NSJ2 640 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 FBXO38Q6PIJ6 1188 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 METTL7BQ6UX53 244 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 SEPT14Q6ZU15 432 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 MOB2Q70IA6 237 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 PLPPR4Q7Z2D5 763 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 ZNF572Q7Z3I7 529 aaPredicted RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 USP37Q86T82 979 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 VPS36Q86VN1 386 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 PARD3BQ8TEW8 1205 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 UBE2Q2Q8WVN8 375 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 HNRNPLLQ8WVV9 542 aaKnown RBP6.05□□□□□ -1.44
NEK3-211ENST00000629912 BSNDQ8WZ55 320 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 OPTNQ96CV9 577 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 SLC10A4Q96EP9 437 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 ALS2CR12Q96Q35 445 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 PCYT2Q99447 389 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 CBWD1Q9BRT8 395 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 SYT11Q9BT88 431 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 PARD6BQ9BYG5 372 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 GPR88Q9GZN0 384 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 PORCNQ9H237 461 aa6.05□□□□□ -1.44
NEK3-211ENST00000629912 PCIF1Q9H4Z3 704 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms