RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 C17orf80Q9BSJ5 609 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 RUSC1Q9BVN2 902 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 NFKBIZQ9BYH8 718 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 GCOM2Q9BZD3 368 aaPredicted RBP12.35□□□□□ -0.43
DDX41-219ENST00000629036 POLR3FQ9H1D9 316 aaPredicted RBP12.35□□□□□ -0.43
DDX41-219ENST00000629036 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 BLOC1S4Q9NUP1 217 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
DDX41-219ENST00000629036 RFXAPO00287 272 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 EYA4O95677 639 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 BMP15O95972 392 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 POU3F3P20264 500 aaPredicted RBP12.34□□□□□ -0.43
DDX41-219ENST00000629036 SLC12A3P55017 1021 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 UBXN11Q5T124 520 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 SLC24A5Q71RS6 500 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 SRGAP1Q7Z6B7 1085 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 RNF149Q8NC42 400 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 AK8Q96MA6 479 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 RAB34Q9BZG1 259 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 CCDC113Q9H0I3 377 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 ZSCAN16Q9H4T2 348 aaPredicted RBP12.34□□□□□ -0.43
DDX41-219ENST00000629036 CERS4Q9HA82 394 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 C11orf16Q9NQ32 467 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 C1orf112Q9NSG2 853 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 HCSTQ9UBK5 93 aa12.34□□□□□ -0.43
DDX41-219ENST00000629036 A0A0U1RQF3 1178 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 MEIS3P2A8K0S8 358 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 ASAP2O43150 1006 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 SLC26A4O43511 780 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 TSPAN1O60635 241 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 F13A1P00488 732 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 ZSCAN22P10073 491 aaPredicted RBP12.33□□□□□ -0.44
DDX41-219ENST00000629036 MXD4Q14582 209 aaPredicted RBP12.33□□□□□ -0.44
DDX41-219ENST00000629036 CLLU1OSQ5K130 101 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 KRT79Q5XKE5 535 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 C1orf186Q6ZWK4 172 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 ECHDC2Q86YB7 292 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 CMTR2Q8IYT2 770 aaKnown RBP12.33□□□□□ -0.44
DDX41-219ENST00000629036 MCPH1Q8NEM0 835 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 ZBED2Q9BTP6 218 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 ELAC1Q9H777 363 aaKnown RBP12.33□□□□□ -0.44
DDX41-219ENST00000629036 TMEM161AQ9NX61 479 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 SRPRBQ9Y5M8 271 aaKnown RBP12.33□□□□□ -0.44
DDX41-219ENST00000629036 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
DDX41-219ENST00000629036 MRPL42Q9Y6G3 142 aaKnown RBP12.33□□□□□ -0.44
DDX41-219ENST00000629036 A0A087X0B3 334 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 DENND3A2RUS2 1198 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 ARHGEF35A5YM69 484 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 C5orf67F2Z3F1 127 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 FGFR1P11362 822 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 SFPQP23246 707 aaKnown RBP eCLIP12.32□□□□□ -0.44
DDX41-219ENST00000629036 MARCKSP29966 332 aaPredicted RBP12.32□□□□□ -0.44
DDX41-219ENST00000629036 DDIT3P35638 169 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 LONP1P36776 959 aaKnown RBP12.32□□□□□ -0.44
DDX41-219ENST00000629036 PHKA2P46019 1235 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 MRE11P49959 708 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 SLC39A14Q15043 492 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 NAALADL2Q58DX5 795 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 ARSHQ5FYA8 562 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 ODR4Q5SWX8 454 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 RINT1Q6NUQ1 792 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 LRRC55Q6ZSA7 311 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 CABP7Q86V35 215 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 KCTD17Q8N5Z5 321 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 LINC00301Q8NCQ3 95 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 GDPD5Q8WTR4 605 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 ARNTL2Q8WYA1 636 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 SCLT1Q96NL6 688 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 CLIC6Q96NY7 704 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 TGS1Q96RS0 853 aaKnown RBP12.32□□□□□ -0.44
DDX41-219ENST00000629036 YME1L1Q96TA2 773 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 CCSER1Q9C0I3 900 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 POLD4Q9HCU8 107 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 CHST12Q9NRB3 414 aa12.32□□□□□ -0.44
DDX41-219ENST00000629036 B4GALT5O43286 388 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 GPR37L1O60883 481 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 ZNF623O75123 536 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 BRD1O95696 1058 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 PLCG1P19174 1290 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 GUCY2CP25092 1073 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 KARSQ15046 597 aaKnown RBP12.31□□□□□ -0.44
DDX41-219ENST00000629036 FAM187BQ17R55 369 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 EPC2Q52LR7 807 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 SPECC1Q5M775 1068 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 MAEAQ7L5Y9 396 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 TAS1R3Q7RTX0 852 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 CATSPER4Q7RTX7 472 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 SYT2Q8N9I0 419 aaPredicted RBP12.31□□□□□ -0.44
DDX41-219ENST00000629036 SPRYD3Q8NCJ5 442 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 EPSTI1Q96J88 318 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 CHAMP1Q96JM3 812 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 CASD1Q96PB1 797 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 PLIN2Q99541 437 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 KIFC3Q9BVG8 833 aa12.31□□□□□ -0.44
DDX41-219ENST00000629036 FZD8Q9H461 694 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms