RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 FAM13AO94988 1023 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 GGPS1O95749 300 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 NMT1P30419 496 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 PRKCEQ02156 737 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 LRRC63Q05C16 580 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 LRMPQ12912 555 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 ITGA7Q13683 1181 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 FSCN1Q16658 493 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 HSDL1Q3SXM5 330 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 METTL7BQ6UX53 244 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 TRMT1LQ7Z2T5 733 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 NELFCDQ8IXH7 590 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 ZNF507Q8TCN5 953 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 CACTINQ8WUQ7 758 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 COPS5Q92905 334 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 PARVGQ9HBI0 331 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 VTA1Q9NP79 307 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 GNEQ9Y223 722 aaKnown RBP10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 ZKSCAN5Q9Y2L8 839 aa10.47□□□□□ -0.73
PDLIM5-223ENST00000627587 DYNC1LI2O43237 492 aaPredicted RBP10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 USO1O60763 962 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 PRPF6O94906 941 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 COPB1P53618 953 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 TBX2Q13207 712 aaPredicted RBP10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 ZC2HC1CQ53FD0 456 aaPredicted RBP10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 MIIPQ5JXC2 388 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 CELF3Q5SZQ8 465 aaKnown RBP10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 ARMCX5Q6P1M9 558 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 OTUD6AQ7L8S5 288 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 TMC6Q7Z403 805 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 FILIP1Q7Z7B0 1213 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 TLK2Q86UE8 772 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 TSG101Q99816 390 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 PPP1R12CQ9BZL4 782 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 HIPK3Q9H422 1215 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 SLC28A3Q9HAS3 691 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 GPRC5CQ9NQ84 441 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 XPNPEP1Q9NQW7 623 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.74
PDLIM5-223ENST00000627587 ESPNB1AK53 854 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 TGFB1I1O43294 461 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 ADCY6O43306 1168 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 FGFR1OPO95684 399 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 PFKMP08237 780 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 ACRP10323 421 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 EEF1GP26641 437 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 CYP2C18P33260 490 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 BEX3Q00994 111 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 XKR9Q5GH70 373 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 CEP135Q66GS9 1140 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 MAEAQ7L5Y9 396 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 ZNF720Q7Z2F6 126 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 ZSCAN30Q86W11 494 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 KSR1Q8IVT5 923 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 FAM114A1Q8IWE2 563 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 MYCT1Q8N699 235 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 CNOT6LQ96LI5 555 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 GPR20Q99678 358 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 VPS16Q9H269 839 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 MRPL44Q9H9J2 332 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 MLXIPQ9HAP2 919 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 RRAGDQ9NQL2 400 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 THEGQ9P2T0 379 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 IMPACTQ9P2X3 320 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 MAGEC2Q9UBF1 373 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 SEL1LQ9UBV2 794 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 EVPLQ92817 2033 aa10.45□□□□□ -0.74
PDLIM5-223ENST00000627587 RBM47A0AV96 593 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 EIF3DO15371 548 aaKnown RBP eCLIP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 GCNT3O95395 438 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 TCF7P36402 384 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 IRX5P78411 483 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 MRPS5P82675 430 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 KNOP1Q1ED39 458 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 BRDTQ58F21 947 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 ODR4Q5SWX8 454 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 CXCL17Q6UXB2 119 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 CREBRFQ8IUR6 639 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 LRRC8AQ8IWT6 810 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 AFAP1L1Q8TED9 768 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 BSNDQ8WZ55 320 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 ASB2Q96Q27 587 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 TIPINQ9BVW5 301 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 ZNF302Q9NR11 478 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 CYP26B1Q9NR63 512 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 PYCARDQ9ULZ3 195 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 TRAF3IP3Q9Y228 551 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 SLC4A7Q9Y6M7 1214 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 GRXCR1A8MXD5 290 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 KPNA6O60684 536 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 LGR5O75473 907 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 OATP04181 439 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 TXNP10599 105 aaKnown RBP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 SMPD1P17405 629 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 PBX2P40425 430 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 CCZ1BP86790 482 aa10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 CCZ1P86791 482 aaPredicted RBP10.44□□□□□ -0.74
PDLIM5-223ENST00000627587 ARHGAP1Q07960 439 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms