RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 MAPK6Q16659 721 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 CDCA2Q69YH5 1023 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 FAM117BQ6P1L5 589 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 FAM173BQ6P4H8 233 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 NOTUMQ6P988 496 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 RTN4RL1Q86UN2 441 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 LINC01599Q8WXQ3 324 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 PGBD4Q96DM1 585 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 PNMA5Q96PV4 448 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 CSRNP2Q9H175 543 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 TTYH1Q9H313 450 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 LARSQ9P2J5 1176 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 ODF2LQ9ULJ1 636 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 STXBP5LQ9Y2K9 1186 aa15.49■□□□□ 0.07
SNRPA1-216ENST00000626000 RALGAPA2Q2PPJ7 1873 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 CUTAO60888 179 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 ZNF623O75123 536 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 SSBP05455 408 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 PLA2G4BP0C869 781 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 SMTNP53814 917 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 ERVK-21P61565 698 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 KRT85P78386 507 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 BTG3Q14201 252 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 FAM187BQ17R55 369 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 CSPP1Q1MSJ5 1256 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 RINT1Q6NUQ1 792 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 C1orf186Q6ZWK4 172 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 CRIPAKQ8N1N5 446 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 SLC17A8Q8NDX2 589 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 ASAP3Q8TDY4 903 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 LARP4BQ92615 738 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 ZNF689Q96CS4 500 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 MRPL9Q9BYD2 267 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 LRRC27Q9C0I9 530 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 CUEDC2Q9H467 287 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 UBN1Q9NPG3 1134 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 AAASQ9NRG9 546 aa15.48■□□□□ 0.07
SNRPA1-216ENST00000626000 CNTNAP2Q9UHC6 1331 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 LINC01553A4QN01 128 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 GTPBP6O43824 516 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 MGEA5O60502 916 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 RB1P06400 928 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 PLCG1P19174 1290 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 SLC12A3P55017 1021 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 MBTD1Q05BQ5 628 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 NAALADL2Q58DX5 795 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 MAEAQ7L5Y9 396 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 ECHDC2Q86YB7 292 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 RAD54LQ92698 747 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 SYMPKQ92797 1274 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 ZNF668Q96K58 619 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 PLVAPQ9BX97 442 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 TMEM117Q9H0C3 514 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 RC3H2Q9HBD1 1191 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 GPRC5CQ9NQ84 441 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 FAM105AQ9NUU6 356 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 LMCD1Q9NZU5 365 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 ZMYM2Q9UBW7 1377 aa15.47■□□□□ 0.07
SNRPA1-216ENST00000626000 A0A087WWV3 80 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 TSPAN1O60635 241 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 KRT18P05783 430 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 MYOGP15173 224 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 FOSL2P15408 326 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 DDIT3P35638 169 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 ANP32AP39687 249 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 ME1P48163 572 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 KARSQ15046 597 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 Q7L0L9 218 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 LRRC43Q8N309 656 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 SPIRE2Q8WWL2 714 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 CLP1Q92989 425 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 CDX2Q99626 313 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 ADPGKQ9BRR6 497 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 C11orf84Q9BUA3 381 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 TRIM6Q9C030 488 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 SCAND2PQ9GZW5 306 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 MAGEF1Q9HAY2 307 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 FAM13BQ9NYF5 915 aa15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 TFIP11Q9UBB9 837 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-216ENST00000626000 ACKR2O00590 384 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 N4BP3O15049 544 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 HIP1RO75146 1068 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 TBCAO75347 108 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 PLS3P13797 630 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 STAT6P42226 847 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 GRIN1Q05586 938 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 GRIN2CQ14957 1233 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 PTPROQ16827 1216 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 TMEM132AQ24JP5 1023 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 FOXD4L5Q5VV16 416 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 GLB1LQ6UWU2 654 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 KCNK18Q7Z418 384 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 TMCO2Q7Z6W1 182 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 GPBP1Q86WP2 473 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 FBXO22Q8NEZ5 403 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 FOXD4L4Q8WXT5 416 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 KCNN1Q92952 543 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 EPSTI1Q96J88 318 aa15.45■□□□□ 0.06
SNRPA1-216ENST00000626000 FAM161BQ96MY7 647 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms