RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 USP38Q8NB14 1042 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 PSPC1Q8WXF1 523 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 APBB2Q92870 758 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 CALML4Q96GE6 196 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 ZNF668Q96K58 619 aaPredicted RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 NACC1Q96RE7 527 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 POLR3CQ9BUI4 534 aaPredicted RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 CELF4Q9BZC1 486 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 ATP6V0A4Q9HBG4 840 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 ANKEF1Q9NU02 776 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 DDX19AQ9NUU7 478 aaKnown RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 SUCLA2Q9P2R7 463 aaPredicted RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 WRAP73Q9P2S5 460 aaPredicted RBP8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 LIMD1Q9UGP4 676 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 PPME1Q9Y570 386 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 CLIC4Q9Y696 253 aa8.04□□□□□ -1.12
NPLOC4-221ENST00000625705 A0A087WWV3 80 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 ABHD14A-ACY1A0A1B0GW23 586 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 DENND3A2RUS2 1198 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 PP2D1A8MPX8 630 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 CAPN5O15484 640 aaPredicted RBP8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 MED24O75448 989 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 RPS6KA5O75582 802 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 SLITRK3O94933 977 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 CHRNA1P02708 482 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 AMHP03971 560 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 BMP1P13497 986 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 ATP2A2P16615 1042 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 VARSP26640 1264 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 RPA1P27694 616 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 MARCKSP29966 332 aaPredicted RBP8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 TFDP1Q14186 410 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 PDIA5Q14554 519 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 TPRNQ4KMQ1 711 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 FAM26DQ5JW98 314 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 MAEAQ7L5Y9 396 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 RPAINQ86UA6 219 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 CABP7Q86V35 215 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 KIAA0319LQ8IZA0 1049 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 MYOCDQ8IZQ8 938 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 C4orf32Q8N8J7 132 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 IGSF22Q8N9C0 903 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 DBF4BQ8NFT6 615 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 HERVK_113Q902F9 699 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 TMEM143Q96AN5 459 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 AK8Q96MA6 479 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 SLC9A7Q96T83 725 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 PLIN2Q99541 437 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 OSMRQ99650 979 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 GCOM2Q9BZD3 368 aaPredicted RBP8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 NT5C3AQ9H0P0 336 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 MAP10Q9P2G4 905 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 TFIP11Q9UBB9 837 aaKnown RBP8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 MSRAQ9UJ68 235 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 KIAA1024Q9UPX6 916 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 DNM3Q9UQ16 869 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 ATP6V1DQ9Y5K8 247 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 LOXHD1Q8IVV2 1947 aa8.03□□□□□ -1.12
NPLOC4-221ENST00000625705 EVPLQ92817 2033 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 SIP14410 1827 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 LRRIQ4A6NIV6 560 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 ZBTB39O15060 712 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 GPR182O15218 404 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 MAFO75444 373 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 ERLIN2O94905 339 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 LYPLA2O95372 231 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 KRT18P05783 430 aaKnown RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 SRGAP2CP0DJJ0 459 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 MUTP22033 750 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 SFPQP23246 707 aaKnown RBP eCLIP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 CDC25AP30304 524 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 CD52P31358 61 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 LONP1P36776 959 aaKnown RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 PHKA2P46019 1235 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 RARRES1P49788 294 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 CRYBB1P53674 252 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 CDC42EP1Q00587 391 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 LPIN1Q14693 890 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 MBTPS1Q14703 1052 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 TARBP2Q15633 366 aaKnown RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 RAB30Q15771 203 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 QPCTQ16769 361 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 PLEKHG4Q58EX7 1191 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 FBXO47Q5MNV8 452 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 FAM102BQ5T8I3 360 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 FAM117BQ6P1L5 589 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 C16orf59Q7L2K0 433 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 MCPH1Q8NEM0 835 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 TSC1Q92574 1164 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 USP28Q96RU2 1077 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 HSD17B14Q9BPX1 270 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 INO80BQ9C086 356 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 POLR3FQ9H1D9 316 aaPredicted RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 BHMT2Q9H2M3 363 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 PRO3102Q9H379 93 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 CXXC1Q9P0U4 656 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms