RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 DLK2Q6UY11 383 aa17.81■□□□□ 0.44
LDB3-208ENST00000623007 MOB2Q70IA6 237 aa17.81■□□□□ 0.44
LDB3-208ENST00000623007 CCDC155Q8N6L0 562 aa17.81■□□□□ 0.44
LDB3-208ENST00000623007 RPGRIP1Q96KN7 1286 aa17.81■□□□□ 0.44
LDB3-208ENST00000623007 PORCNQ9H237 461 aa17.81■□□□□ 0.44
LDB3-208ENST00000623007 POLD4Q9HCU8 107 aa17.81■□□□□ 0.44
LDB3-208ENST00000623007 ARHGAP28Q9P2N2 729 aa17.81■□□□□ 0.44
LDB3-208ENST00000623007 DDX41Q9UJV9 622 aaKnown RBP17.81■□□□□ 0.44
LDB3-208ENST00000623007 EMSYQ7Z589 1322 aa17.81■□□□□ 0.44
LDB3-208ENST00000623007 NOP56O00567 594 aaKnown RBP17.8■□□□□ 0.44
LDB3-208ENST00000623007 GGPS1O95749 300 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 TUBBP07437 444 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 IFI16Q16666 785 aaKnown RBP17.8■□□□□ 0.44
LDB3-208ENST00000623007 SLC35F6Q8N357 371 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 SCFD2Q8WU76 684 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 FBXL18Q96ME1 805 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 POLR3FQ9H1D9 316 aaPredicted RBP17.8■□□□□ 0.44
LDB3-208ENST00000623007 MORF4L1Q9UBU8 362 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 APEX2Q9UBZ4 518 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 TSKSQ9UJT2 592 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 BTNL10A8MVZ5 291 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 LGR5O75473 907 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 LDHAP00338 332 aaKnown RBP17.8■□□□□ 0.44
LDB3-208ENST00000623007 SLC9A1P19634 815 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 JAM2P57087 298 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 MTERF2Q49AM1 385 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 CELF3Q5SZQ8 465 aaKnown RBP17.8■□□□□ 0.44
LDB3-208ENST00000623007 CALR3Q96L12 384 aaKnown RBP17.8■□□□□ 0.44
LDB3-208ENST00000623007 PARK7Q99497 189 aaKnown RBP17.8■□□□□ 0.44
LDB3-208ENST00000623007 TMEM134Q9H6X4 195 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 GBA2Q9HCG7 927 aaPredicted RBP17.8■□□□□ 0.44
LDB3-208ENST00000623007 TXNRD2Q9NNW7 524 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 INTUQ9ULD6 942 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 DIS3Q9Y2L1 958 aaKnown RBP17.8■□□□□ 0.44
LDB3-208ENST00000623007 JRKLQ9Y4A0 524 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 IVNS1ABPQ9Y6Y0 642 aa17.8■□□□□ 0.44
LDB3-208ENST00000623007 GSTTP1A0A1W2PQM5 241 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 PIGRP01833 764 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 PRLRP16471 622 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 EFNA5P52803 228 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 SP4Q02446 784 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 NCBP1Q09161 790 aaKnown RBP17.79■□□□□ 0.44
LDB3-208ENST00000623007 IRF5Q13568 498 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 BMS1Q14692 1282 aaKnown RBP17.79■□□□□ 0.44
LDB3-208ENST00000623007 IQCEQ6IPM2 695 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 UBE2Q2Q8WVN8 375 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 BCAS3Q9H6U6 928 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 VTA1Q9NP79 307 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 GPRC5CQ9NQ84 441 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 XPNPEP1Q9NQW7 623 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 ARGLU1Q9NWB6 273 aaPredicted RBP17.79■□□□□ 0.44
LDB3-208ENST00000623007 SLC5A4Q9NY91 659 aa17.79■□□□□ 0.44
LDB3-208ENST00000623007 HNRNPDLO14979 420 aaKnown RBP17.78■□□□□ 0.44
LDB3-208ENST00000623007 TCF7P36402 384 aaPredicted RBP17.78■□□□□ 0.44
LDB3-208ENST00000623007 ARL2P36404 184 aa17.78■□□□□ 0.44
LDB3-208ENST00000623007 CKAP4Q07065 602 aaKnown RBP17.78■□□□□ 0.44
LDB3-208ENST00000623007 MXD4Q14582 209 aaPredicted RBP17.78■□□□□ 0.44
LDB3-208ENST00000623007 TARBP2Q15633 366 aaKnown RBP17.78■□□□□ 0.44
LDB3-208ENST00000623007 SNRNP35Q16560 246 aaKnown RBP17.78■□□□□ 0.44
LDB3-208ENST00000623007 IER5Q5VY09 327 aa17.78■□□□□ 0.44
LDB3-208ENST00000623007 DPY19L2P1Q6NXN4 242 aa17.78■□□□□ 0.44
LDB3-208ENST00000623007 KSR1Q8IVT5 923 aa17.78■□□□□ 0.44
LDB3-208ENST00000623007 GPD1LQ8N335 351 aa17.78■□□□□ 0.44
LDB3-208ENST00000623007 DEPTORQ8TB45 409 aa17.78■□□□□ 0.44
LDB3-208ENST00000623007 NOX5Q96PH1 765 aa17.78■□□□□ 0.44
LDB3-208ENST00000623007 SMARCAD1Q9H4L7 1026 aa17.78■□□□□ 0.44
LDB3-208ENST00000623007 ZCCHC17Q9NP64 241 aaKnown RBP17.78■□□□□ 0.44
LDB3-208ENST00000623007 SIX2Q9NPC8 291 aa17.78■□□□□ 0.44
LDB3-208ENST00000623007 CCL15-CCL14A0A0B4J2E2 113 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 PDHXO00330 501 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 MAFO75444 373 aaPredicted RBP17.77■□□□□ 0.44
LDB3-208ENST00000623007 SOX5P35711 763 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 CCL15Q16663 113 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 Q3C1V9 767 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 PAPD7Q5XG87 772 aaKnown RBP17.77■□□□□ 0.44
LDB3-208ENST00000623007 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 DHX37Q8IY37 1157 aaKnown RBP17.77■□□□□ 0.44
LDB3-208ENST00000623007 MSL3Q8N5Y2 521 aaKnown RBP17.77■□□□□ 0.44
LDB3-208ENST00000623007 POMGNT1Q8WZA1 660 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 GOLGA1Q92805 767 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 BICD1Q96G01 975 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 CBWD1Q9BRT8 395 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 INTS2Q9H0H0 1204 aaKnown RBP17.77■□□□□ 0.44
LDB3-208ENST00000623007 FHOD1Q9Y613 1164 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 SAR1BQ9Y6B6 198 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 STYXL1Q9Y6J8 313 aa17.77■□□□□ 0.44
LDB3-208ENST00000623007 TMEM150BA6NC51 233 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 TLR2O60603 784 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 ZC3H11AO75152 810 aaKnown RBP eCLIP17.77■□□□□ 0.43
LDB3-208ENST00000623007 GJA5P36382 358 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 MXI1P50539 228 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 LAMC2Q13753 1193 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 WDR78Q5VTH9 848 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 KRT39Q6A163 491 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 IRF2BP2Q7Z5L9 587 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 GPR161Q8N6U8 529 aaKnown RBP17.77■□□□□ 0.43
LDB3-208ENST00000623007 ATP8B4Q8TF62 1192 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 MS4A4AQ96JQ5 239 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 MFSD14AQ96MC6 490 aa17.77■□□□□ 0.43
LDB3-208ENST00000623007 GPR20Q99678 358 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms