RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ELAC2Q9BQ52 826 aaKnown RBP13.8□□□□□ -0.2
MSH6-215ENST00000622629 TLR10Q9BXR5 811 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 PODXLO00592 558 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 GLI1P08151 1106 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 SWSAP1Q6NVH7 229 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 CCDC137Q6PK04 289 aaKnown RBP13.8□□□□□ -0.2
MSH6-215ENST00000622629 CYFIP1Q7L576 1253 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 ZNF571Q7Z3V5 609 aaPredicted RBP13.8□□□□□ -0.2
MSH6-215ENST00000622629 RNF146Q9NTX7 359 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 TXNDC16Q9P2K2 825 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 SGK1O00141 431 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 MMEP08473 750 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 E2F5Q15329 346 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 MIIPQ5JXC2 388 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 KRT39Q6A163 491 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 C1orf54Q8WWF1 131 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 AGBL1Q96MI9 1066 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 KCNQ5Q9NR82 932 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 NRBP2Q9NSY0 501 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 ADAM22Q9P0K1 906 aa13.8□□□□□ -0.2
MSH6-215ENST00000622629 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
MSH6-215ENST00000622629 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 CCND2P30279 289 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 PMS2P54278 862 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 NPEPPSP55786 919 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 PPP2R2AP63151 447 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 GRM1Q13255 1194 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 CCDC38Q502W7 563 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 SCARA5Q6ZMJ2 495 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 TBC1D31Q96DN5 1066 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.79□□□□□ -0.2
MSH6-215ENST00000622629 LRRD1A4D1F6 860 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 GMNCA6NCL1 334 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 EIF3HO15372 352 aaKnown RBP eCLIP13.79□□□□□ -0.26e-7■■□□□ 13.3
MSH6-215ENST00000622629 PSAPP07602 524 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 C6orf163Q5TEZ5 329 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 FYB2Q5VWT5 728 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 NLRP14Q86W24 1093 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
MSH6-215ENST00000622629 TMEM39BQ9GZU3 492 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 CNOT10Q9H9A5 744 aaKnown RBP13.79□□□□□ -0.2
MSH6-215ENST00000622629 SIK3Q9Y2K2 1263 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 STAM2O75886 525 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 YWHABP31946 246 aaKnown RBP13.79□□□□□ -0.2
MSH6-215ENST00000622629 ATP11AP98196 1134 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 PPP2R5AQ15172 486 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 PLA2G4FQ68DD2 849 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 TMEM270Q6UE05 265 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 GADL1Q6ZQY3 521 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 CREG2Q8IUH2 290 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 RTKN2Q8IZC4 609 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 CASKIN2Q8WXE0 1202 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
MSH6-215ENST00000622629 HSPBP1Q9NZL4 362 aa13.79□□□□□ -0.2
MSH6-215ENST00000622629 MAP2K7O14733 419 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 ENTPD3O75355 529 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 TNNC2P02585 160 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 PRLRP16471 622 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 MARK3P27448 753 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 TMED2Q15363 201 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 SNRNP48Q6IEG0 339 aaKnown RBP13.78□□□□□ -0.2
MSH6-215ENST00000622629 HIBCHQ6NVY1 386 aaPredicted RBP13.78□□□□□ -0.2
MSH6-215ENST00000622629 HAS1Q92839 578 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 RNF25Q96BH1 459 aaPredicted RBP13.78□□□□□ -0.2
MSH6-215ENST00000622629 MSTO1Q9BUK6 570 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 VCPKMTQ9H867 229 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 AGPAT3Q9NRZ7 376 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 LRRC37A3O60309 1634 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 SUN1O94901 812 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 KRT1P04264 644 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 KCNJ1P48048 391 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 PSMC5P62195 406 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 DALRD3Q5D0E6 543 aaKnown RBP13.78□□□□□ -0.2
MSH6-215ENST00000622629 C6orf118Q5T5N4 469 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 BSPRYQ5W0U4 402 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 NUGGCQ68CJ6 796 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 TPCN2Q8NHX9 752 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 TRIM11Q96F44 468 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 ZNF668Q96K58 619 aaPredicted RBP13.78□□□□□ -0.2
MSH6-215ENST00000622629 ZNF408Q9H9D4 720 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 PNMA2Q9UL42 364 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 ODF2LQ9ULJ1 636 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 DIS3Q9Y2L1 958 aaKnown RBP13.78□□□□□ -0.2
MSH6-215ENST00000622629 ALG6Q9Y672 507 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 FAM86B1E9PN63 330 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 RNF8O76064 485 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 FAM86B2P0C5J1 330 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 JAK3P52333 1124 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
MSH6-215ENST00000622629 MIS18BP1Q6P0N0 1132 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 DNAJC24Q6P3W2 148 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 LRRC31Q6UY01 552 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 SLC51AQ86UW1 340 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 CDHR1Q96JP9 859 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 ZDHHC15Q96MV8 337 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 CSADQ9Y600 493 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 KDM3BQ7LBC6 1761 aa13.78□□□□□ -0.2
MSH6-215ENST00000622629 FOXN3O00409 490 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms