RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 CD302Q8IX05 232 aa21.98■■□□□ 1.11
PCSK6-217ENST00000618548 TRIM55Q9BYV6 548 aa21.98■■□□□ 1.11
PCSK6-217ENST00000618548 CARD9Q9H257 536 aa21.98■■□□□ 1.11
PCSK6-217ENST00000618548 MAD2L2Q9UI95 211 aa21.98■■□□□ 1.11
PCSK6-217ENST00000618548 CLDN3O15551 220 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 COG7P83436 770 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 MKRN3Q13064 507 aaKnown RBP21.97■■□□□ 1.11
PCSK6-217ENST00000618548 QPCTQ16769 361 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 EDRF1Q3B7T1 1238 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 RBM26Q5T8P6 1007 aaKnown RBP21.97■■□□□ 1.11
PCSK6-217ENST00000618548 NEDD1Q8NHV4 660 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 TTC17Q96AE7 1141 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 VTI1AQ96AJ9 217 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 MYBP10242 640 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 GHRP10912 638 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 DDR1Q08345 913 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 OGFOD1Q8N543 542 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 DLGAP2Q9P1A6 1054 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 C15orf41Q9Y2V0 281 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 GOLGA8SH3BPF8 625 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 GOLGA8MH3BSY2 632 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 ZBTB5O15062 677 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 HAUS5O94927 633 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 GSTA1P08263 222 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 CLEC10AQ8IUN9 316 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 KIAA0825Q8IV33 1275 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 SUPT20HQ8NEM7 779 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 POMGNT1Q8WZA1 660 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 NACC1Q96RE7 527 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 AGPAT1Q99943 283 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 ALG13Q9NP73 1137 aaKnown RBP21.97■■□□□ 1.11
PCSK6-217ENST00000618548 IRAK4Q9NWZ3 460 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 SLAIN2Q9P270 581 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 ARHGAP4P98171 946 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 PSMD6Q15008 389 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 SBK1Q52WX2 424 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 XKR9Q5GH70 373 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 COL23A1Q86Y22 540 aaPredicted RBP21.97■■□□□ 1.11
PCSK6-217ENST00000618548 NGLY1Q96IV0 654 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 TTC1Q99614 292 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 STK33Q9BYT3 514 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 WNT8AQ9H1J5 351 aa21.97■■□□□ 1.11
PCSK6-217ENST00000618548 TRAPPC3LQ5T215 181 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 CASC4Q6P4E1 433 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.96■■□□□ 1.11
PCSK6-217ENST00000618548 HIPK4Q8NE63 616 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 MYO5BQ9ULV0 1848 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 CDH16O75309 829 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 CTCFP49711 727 aaPredicted RBP21.96■■□□□ 1.11
PCSK6-217ENST00000618548 TRMT10CQ7L0Y3 403 aaKnown RBP21.96■■□□□ 1.11
PCSK6-217ENST00000618548 ADGRF4Q8IZF3 695 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 SLC17A8Q8NDX2 589 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 PYROXD1Q8WU10 500 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 SNF8Q96H20 258 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 PITPNM2Q9BZ72 1349 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 DNAJC3Q13217 504 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 C4orf33Q8N1A6 199 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 MREGQ8N565 214 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 GLIS3Q8NEA6 775 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 REEP2Q9BRK0 252 aa21.96■■□□□ 1.11
PCSK6-217ENST00000618548 COMTP21964 271 aa21.95■■□□□ 1.11
PCSK6-217ENST00000618548 TNFRSF8P28908 595 aa21.95■■□□□ 1.11
PCSK6-217ENST00000618548 ZNF34Q8IZ26 560 aa21.95■■□□□ 1.11
PCSK6-217ENST00000618548 PRCCQ92733 491 aaPredicted RBP21.95■■□□□ 1.11
PCSK6-217ENST00000618548 RNF25Q96BH1 459 aaPredicted RBP21.95■■□□□ 1.11
PCSK6-217ENST00000618548 TUBB6Q9BUF5 446 aa21.95■■□□□ 1.11
PCSK6-217ENST00000618548 THAP2Q9H0W7 228 aa21.95■■□□□ 1.11
PCSK6-217ENST00000618548 RGL1Q9NZL6 768 aa21.95■■□□□ 1.11
PCSK6-217ENST00000618548 TMEM253P0C7T8 217 aa21.95■■□□□ 1.1
PCSK6-217ENST00000618548 TARSP26639 723 aaKnown RBP21.95■■□□□ 1.1
PCSK6-217ENST00000618548 PON1P27169 355 aa21.95■■□□□ 1.1
PCSK6-217ENST00000618548 DNAJC9Q8WXX5 260 aa21.95■■□□□ 1.1
PCSK6-217ENST00000618548 FGD4Q96M96 766 aa21.95■■□□□ 1.1
PCSK6-217ENST00000618548 TEKT3Q9BXF9 490 aa21.95■■□□□ 1.1
PCSK6-217ENST00000618548 FXR2P51116 673 aaKnown RBP eCLIP21.95■■□□□ 1.1
PCSK6-217ENST00000618548 ABCF3Q9NUQ8 709 aa21.95■■□□□ 1.1
PCSK6-217ENST00000618548 ATMINO43313 823 aaPredicted RBP21.94■■□□□ 1.1
PCSK6-217ENST00000618548 AGGF1Q8N302 714 aaeCLIP21.94■■□□□ 1.19e-9■■■■□ 24.8
PCSK6-217ENST00000618548 RBM17Q96I25 401 aaKnown RBP21.94■■□□□ 1.1
PCSK6-217ENST00000618548 ZNF577Q9BSK1 485 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 PPARGC1AQ9UBK2 798 aaKnown RBP21.94■■□□□ 1.1
PCSK6-217ENST00000618548 POLR2MP0CAP2 368 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 IZUMO3Q5VZ72 239 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 KCNV1Q6PIU1 500 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 ANGPTL2Q9UKU9 493 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 RANBP1P43487 201 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 KCNMA1Q12791 1236 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 CENPUQ71F23 418 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 FAM161BQ96MY7 647 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 ACCSQ96QU6 501 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 FAM118BQ9BPY3 351 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 SALL4Q9UJQ4 1053 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 PCDHGC5Q9Y5F6 944 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 NT5C2P49902 561 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 SMC1BQ8NDV3 1235 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 FERMT1Q9BQL6 677 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 GINM1Q9NU53 330 aa21.94■■□□□ 1.1
PCSK6-217ENST00000618548 GRIN2DO15399 1336 aa21.93■■□□□ 1.1
PCSK6-217ENST00000618548 KRT1P04264 644 aa21.93■■□□□ 1.1
PCSK6-217ENST00000618548 FMO5P49326 533 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms