RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 GMIPQ9P107 970 aa5.69□□□□□ -1.5
CUL3-216ENST00000617432 TCAF1Q9Y4C2 921 aa5.69□□□□□ -1.5
CUL3-216ENST00000617432 PCSK5Q92824 1860 aa5.69□□□□□ -1.5
CUL3-216ENST00000617432 PAPPA2Q9BXP8 1791 aa5.69□□□□□ -1.5
CUL3-216ENST00000617432 ZBED9Q6R2W3 1325 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 FAM205AQ6ZU69 1335 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 MROH5Q6ZUA9 1318 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 KIF16BQ96L93 1317 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 ECM29Q5VYK3 1845 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 UBE2Q2LH0YL09 131 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 MUSKO15146 869 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 FGF10O15520 208 aaPredicted RBP5.68□□□□□ -1.5
CUL3-216ENST00000617432 GPR42O15529 346 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 PDE8BO95263 885 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 CTSHP09668 335 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 CT47B1P0C2W7 299 aaPredicted RBP5.68□□□□□ -1.5
CUL3-216ENST00000617432 CYP2C8P10632 490 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 HIBADHP31937 336 aaKnown RBP5.68□□□□□ -1.5
CUL3-216ENST00000617432 PHKA1P46020 1223 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 PWP1Q13610 501 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 UBE4AQ14139 1066 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 SPDYAQ5MJ70 313 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 MFSD14BQ5SR56 506 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 INTS3Q68E01 1043 aaKnown RBP5.68□□□□□ -1.5
CUL3-216ENST00000617432 ATF7IPQ6VMQ6 1270 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 FBXO33Q7Z6M2 555 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 CABP7Q86V35 215 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 RASAL3Q86YV0 1011 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 FBXO27Q8NI29 283 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 PEX11GQ96HA9 241 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 RHOVQ96L33 236 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 FAM161BQ96MY7 647 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 OTOFQ9HC10 1997 aa5.68□□□□□ -1.5
CUL3-216ENST00000617432 MYO3BQ8WXR4 1341 aa5.67□□□□□ -1.5
CUL3-216ENST00000617432 TLR3O15455 904 aaKnown RBP5.67□□□□□ -1.5
CUL3-216ENST00000617432 POLR2BP30876 1174 aaKnown RBP5.67□□□□□ -1.5
CUL3-216ENST00000617432 KIF23Q02241 960 aaPredicted RBP5.67□□□□□ -1.5
CUL3-216ENST00000617432 TFCP2Q12800 502 aa5.67□□□□□ -1.5
CUL3-216ENST00000617432 PUM3Q15397 648 aaKnown RBP5.67□□□□□ -1.5
CUL3-216ENST00000617432 CWF19L1Q69YN2 538 aaKnown RBP5.67□□□□□ -1.5
CUL3-216ENST00000617432 RGMBQ6NW40 437 aa5.67□□□□□ -1.5
CUL3-216ENST00000617432 CEP89Q96ST8 783 aa5.67□□□□□ -1.5
CUL3-216ENST00000617432 GORASP1Q9BQQ3 440 aa5.67□□□□□ -1.5
CUL3-216ENST00000617432 C11orf84Q9BUA3 381 aaPredicted RBP5.67□□□□□ -1.5
CUL3-216ENST00000617432 RSRP1Q9BUV0 290 aa5.67□□□□□ -1.5
CUL3-216ENST00000617432 MKRN2Q9H000 416 aaKnown RBP5.67□□□□□ -1.5
CUL3-216ENST00000617432 TDRD3Q9H7E2 651 aaKnown RBP5.67□□□□□ -1.5
CUL3-216ENST00000617432 VEZTQ9HBM0 779 aa5.67□□□□□ -1.5
CUL3-216ENST00000617432 NUDT5Q9UKK9 219 aa5.67□□□□□ -1.5
CUL3-216ENST00000617432 MYH13Q9UKX3 1938 aa5.67□□□□□ -1.5
CUL3-216ENST00000617432 C9orf118A6NHY6 69 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 TCP10L2B9ZVM9 353 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 NPIPB8E9PQR5 432 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 B4GALT3O60512 393 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 ACRP10323 421 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 PRDX5P30044 214 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 CRKP46108 304 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 RBM5P52756 815 aaKnown RBP eCLIP5.66□□□□□ -1.5
CUL3-216ENST00000617432 TIMM10P62072 90 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 AUHQ13825 339 aaKnown RBP5.66□□□□□ -1.5
CUL3-216ENST00000617432 DLGAP5Q15398 846 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 ATP2B3Q16720 1220 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 ZKSCAN2Q63HK3 967 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 KYQ8NBH2 561 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 RGS22Q8NE09 1264 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 ARHGAP45Q92619 1136 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 CLMNQ96JQ2 1002 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 DSCC1Q9BVC3 393 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 DEFB129Q9H1M3 183 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 HDAC9Q9UKV0 1011 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 PCDHB14Q9Y5E9 798 aa5.66□□□□□ -1.5
CUL3-216ENST00000617432 CIAO1O76071 339 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 SLC5A1P13866 664 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 L1CAMP32004 1257 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 ECE1P42892 770 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 CTCFP49711 727 aaPredicted RBP5.65□□□□□ -1.5
CUL3-216ENST00000617432 FKBP1AP62942 108 aaKnown RBP5.65□□□□□ -1.5
CUL3-216ENST00000617432 RASA3Q14644 834 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 C20orf194Q5TEA3 1177 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 VPS37DQ86XT2 251 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 ITPRIPQ8IWB1 547 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 C2orf69Q8N8R5 385 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 NETO2Q8NC67 525 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 ZNF384Q8TF68 577 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 LPIN2Q92539 896 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 TMEM39BQ9GZU3 492 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 RXFP1Q9HBX9 757 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 COPRSQ9NQ92 184 aa5.65□□□□□ -1.5
CUL3-216ENST00000617432 ZNF70Q9UC06 446 aaPredicted RBP5.65□□□□□ -1.5
CUL3-216ENST00000617432 A0A1B0GUL7 405 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 FRAT2O75474 233 aaPredicted RBP5.65□□□□□ -1.51
CUL3-216ENST00000617432 TBC1D8O95759 1140 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 GNAI2P04899 355 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 IFIT1P09914 478 aaKnown RBP5.65□□□□□ -1.51
CUL3-216ENST00000617432 NOP2P46087 812 aaKnown RBP5.65□□□□□ -1.51
CUL3-216ENST00000617432 NANOS3P60323 173 aaKnown RBP5.65□□□□□ -1.51
CUL3-216ENST00000617432 DPTQ07507 201 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 ABHD18Q0P651 414 aa5.65□□□□□ -1.51
CUL3-216ENST00000617432 MTX1Q13505 466 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms