RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 HCSTQ9UBK5 93 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 LRWD1Q9UFC0 647 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 ST3GAL5Q9UNP4 418 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 SRPRBQ9Y5M8 271 aaKnown RBP16.56■□□□□ 0.24
UBXN1-218ENST00000616865 STK24Q9Y6E0 443 aa16.56■□□□□ 0.24
UBXN1-218ENST00000616865 WDR81Q562E7 1941 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 GOLGA6L22H0YM25 854 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 PER2O15055 1255 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 GPR182O15218 404 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 CUTAO60888 179 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 C22orf31O95567 290 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 PSAPP07602 524 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 LONP1P36776 959 aaKnown RBP16.55■□□□□ 0.24
UBXN1-218ENST00000616865 TXLNAP40222 546 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 RBM10P98175 930 aaKnown RBP16.55■□□□□ 0.24
UBXN1-218ENST00000616865 PPP2R5CQ13362 524 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 PDIA5Q14554 519 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 DUSP6Q16828 381 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 MIS18BP1Q6P0N0 1132 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 PDXDC2PQ6P474 469 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 FAM228AQ86W67 206 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 SMAP1Q8IYB5 467 aaPredicted RBP16.55■□□□□ 0.24
UBXN1-218ENST00000616865 COLGALT1Q8NBJ5 622 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 VN1R2Q8NFZ6 395 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 RDM1Q8NG50 284 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 RASSF8Q8NHQ8 419 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 PPP1R16BQ96T49 567 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 CDCA3Q99618 268 aaPredicted RBP16.55■□□□□ 0.24
UBXN1-218ENST00000616865 OSMRQ99650 979 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 PHF7Q9BWX1 381 aaPredicted RBP16.55■□□□□ 0.24
UBXN1-218ENST00000616865 DISC1Q9NRI5 854 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 TMEM161AQ9NX61 479 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 FBXO2Q9UK22 296 aaPredicted RBP16.55■□□□□ 0.24
UBXN1-218ENST00000616865 VAV3Q9UKW4 847 aa16.55■□□□□ 0.24
UBXN1-218ENST00000616865 MORC2Q9Y6X9 1032 aaPredicted RBP16.55■□□□□ 0.24
UBXN1-218ENST00000616865 TMEM221A6NGB7 291 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 POTEMA6NI47 508 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 M0R296 226 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 FSCN2O14926 492 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 ATF7P17544 494 aaPredicted RBP16.54■□□□□ 0.24
UBXN1-218ENST00000616865 ATP4AP20648 1035 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 CRYBB1P53674 252 aaPredicted RBP16.54■□□□□ 0.24
UBXN1-218ENST00000616865 ERVFC1P60507 584 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 ZXDAP98168 799 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 KIZQ2M2Z5 673 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 THNSL1Q8IYQ7 743 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 PRSS33Q8NF86 280 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 BBXQ8WY36 941 aaPredicted RBP16.54■□□□□ 0.24
UBXN1-218ENST00000616865 SUSD6Q92537 303 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 AK8Q96MA6 479 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 CLIC6Q96NY7 704 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 CWH43Q9H720 699 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 ELAC1Q9H777 363 aaKnown RBP16.54■□□□□ 0.24
UBXN1-218ENST00000616865 TYW1Q9NV66 732 aaKnown RBP16.54■□□□□ 0.24
UBXN1-218ENST00000616865 PCDHA10Q9Y5I2 948 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 TCHHQ07283 1943 aa16.54■□□□□ 0.24
UBXN1-218ENST00000616865 VTNP04004 478 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 FGFR1P11362 822 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 LAG3P18627 525 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 UBA7P41226 1012 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 EPHA7Q15375 998 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 IL17AQ16552 155 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 KRT79Q5XKE5 535 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 HAUS3Q68CZ6 603 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 PDE12Q6L8Q7 609 aaKnown RBP16.53■□□□□ 0.24
UBXN1-218ENST00000616865 SWSAP1Q6NVH7 229 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 PBXIP1Q96AQ6 731 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 CDK5RAP3Q96JB5 506 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 CSRNP2Q9H175 543 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 PCDHA7Q9UN72 937 aa16.53■□□□□ 0.24
UBXN1-218ENST00000616865 MAFBQ9Y5Q3 323 aaPredicted RBP16.53■□□□□ 0.24
UBXN1-218ENST00000616865 EML1O00423 815 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 DKC1O60832 514 aaKnown RBP eCLIP16.52■□□□□ 0.24
UBXN1-218ENST00000616865 GPR32O75388 356 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 SRGAP2BP0DMP2 458 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 CCT6AP40227 531 aaKnown RBP16.52■□□□□ 0.24
UBXN1-218ENST00000616865 FAM189BP81408 668 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 KCNC3Q14003 757 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 DSC3Q14574 896 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 ZRSR1Q15695 479 aaKnown RBP16.52■□□□□ 0.24
UBXN1-218ENST00000616865 SUGP1Q8IWZ8 645 aaKnown RBP16.52■□□□□ 0.24
UBXN1-218ENST00000616865 CKAP2LQ8IYA6 745 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 IGSF22Q8N9C0 903 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 SNX29Q8TEQ0 813 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 RPGRIP1Q96KN7 1286 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 EIF2AK1Q9BQI3 630 aaKnown RBP16.52■□□□□ 0.24
UBXN1-218ENST00000616865 FAM13BQ9NYF5 915 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 LZTS1Q9Y250 596 aa16.52■□□□□ 0.24
UBXN1-218ENST00000616865 PTPN5P54829 565 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 PLCB3Q01970 1234 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 GRIN1Q05586 938 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 SPIRE1Q08AE8 756 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 SPECC1Q5M775 1068 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 IER5LQ5T953 404 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 PLPP4Q5VZY2 271 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 TMEM184AQ6ZMB5 413 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 CABP7Q86V35 215 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 LRRC43Q8N309 656 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms