RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 NUDT12Q9BQG2 462 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 HOMER2Q9NSB8 354 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 USP40Q9NVE5 1235 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 SPATA31D1Q6ZQQ2 1576 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 ATP2A1O14983 1001 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 RTN3O95197 1032 aaPredicted RBP16.76■□□□□ 0.27
SYNRG-223ENST00000616179 RNF207Q6ZRF8 634 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 PIGWQ7Z7B1 504 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 ARHGAP24Q8N264 748 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 ERMNQ8TAM6 284 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 JDP2Q8WYK2 163 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 HIC2Q96JB3 615 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 SYT15Q9BQS2 421 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 CENPKQ9BS16 269 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 KIAA1683Q9H0B3 1180 aa16.76■□□□□ 0.27
SYNRG-223ENST00000616179 SUDS3Q9H7L9 328 aaPredicted RBP16.76■□□□□ 0.27
SYNRG-223ENST00000616179 RIPK2O43353 540 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 KRT5P13647 590 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 KRT17Q04695 432 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 GRB10Q13322 594 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 ANO7Q6IWH7 933 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 CCNJLQ8IV13 435 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.75■□□□□ 0.27
SYNRG-223ENST00000616179 KIFAP3Q92845 792 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 TBC1D10AQ9BXI6 508 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 PITPNM2Q9BZ72 1349 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 THAP2Q9H0W7 228 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 PHTF1Q9UMS5 762 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 FTLP02792 175 aaPredicted RBP16.75■□□□□ 0.27
SYNRG-223ENST00000616179 FESP07332 822 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 TAF1BQ53T94 588 aaPredicted RBP16.75■□□□□ 0.27
SYNRG-223ENST00000616179 SYT2Q8N9I0 419 aaPredicted RBP16.75■□□□□ 0.27
SYNRG-223ENST00000616179 KLF6Q99612 283 aaPredicted RBP16.75■□□□□ 0.27
SYNRG-223ENST00000616179 EPAS1Q99814 870 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 ERVK-5Q9HDB9 667 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 HAUS5O94927 633 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 UNC5CO95185 931 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 TRIM49P0CI25 452 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 TRIM49CP0CI26 452 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 YY1P25490 414 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 BNIP1Q12981 228 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 THOC5Q13769 683 aaKnown RBP16.75■□□□□ 0.27
SYNRG-223ENST00000616179 PDE1CQ14123 709 aaPredicted RBP16.75■□□□□ 0.27
SYNRG-223ENST00000616179 TRIM74Q86UV6 250 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 TRIM73Q86UV7 250 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 NMD3Q96D46 503 aaKnown RBP16.75■□□□□ 0.27
SYNRG-223ENST00000616179 SLCO1B3Q9NPD5 702 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 CYP39A1Q9NYL5 469 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 TCEAL9Q9UHQ7 104 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 CLDN3O15551 220 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 GSTT1P30711 240 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 SERPINB6P35237 376 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 ABL2P42684 1182 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 NT5DC3Q86UY8 548 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 FAM186BQ8IYM0 893 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 MAML1Q92585 1016 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 BTBD6Q96KE9 485 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 PWWP2AQ96N64 755 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 SAYSD1Q9NPB0 183 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 ZBTB1Q9Y2K1 713 aa16.75■□□□□ 0.27
SYNRG-223ENST00000616179 CLTCQ00610 1675 aaKnown RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 PHF2O75151 1096 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 BAG3O95817 575 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 STAT3P40763 770 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 GALNT17Q6IS24 598 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 MTDHQ86UE4 582 aaKnown RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 TRIM59Q8IWR1 403 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 C1orf131Q8NDD1 294 aaKnown RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 GOLGA8SH3BPF8 625 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 GOLGA8MH3BSY2 632 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 LMNAP02545 664 aaKnown RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 PLS3P13797 630 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 ATP6V1C1P21283 382 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 CDCA2Q69YH5 1023 aaPredicted RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 SFR1Q86XK3 245 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 ST13P4Q8IZP2 240 aaPredicted RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 PPM1KQ8N3J5 372 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 RBBP8NLQ8NC74 664 aaPredicted RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 FAM81AQ8TBF8 368 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 ATXN2LQ8WWM7 1075 aaKnown RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 ATG4AQ8WYN0 398 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 ZNF653Q96CK0 615 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 CEP63Q96MT8 703 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 UBE2TQ9NPD8 197 aaPredicted RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 DCP1AQ9NPI6 582 aaPredicted RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 PICK1Q9NRD5 415 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 SLIT1O75093 1534 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 SYNGAP1Q96PV0 1343 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 DESP17661 470 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 SP100P23497 879 aaPredicted RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 TPP2P29144 1249 aaPredicted RBP16.74■□□□□ 0.27
SYNRG-223ENST00000616179 SERPINB3P29508 390 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 PTENP60484 403 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 PRR16Q569H4 304 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 FAM13CQ8NE31 585 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 PIP4K2CQ8TBX8 421 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 TNFRSF25Q93038 417 aa16.74■□□□□ 0.27
SYNRG-223ENST00000616179 HAUS1Q96CS2 278 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms