RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 GPNMBQ14956 572 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 FMR1NBQ8N0W7 255 aaPredicted RBP14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 CNNM3Q8NE01 707 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 DEPTORQ8TB45 409 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 TMEM40Q8WWA1 233 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 SPIRE2Q8WWL2 714 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 TIGD1Q96MW7 591 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 TRIM9Q9C026 710 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 CDHR5Q9HBB8 845 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 SERTAD1Q9UHV2 236 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 HOOK1Q9UJC3 728 aaKnown RBP14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 PADI3Q9ULW8 664 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 GBF1Q92538 1859 aa14.33□□□□□ -0.12
SRGAP2C-204ENST00000613462 NPHP3-ACAD11A0A0J9YXS1 232 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 FRMD3A2A2Y4 597 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 CCDC169A6NNP5 214 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 ERLIN2O94905 339 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 FGBP02675 491 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 CD52P31358 61 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 NPTX2P47972 431 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 PEX3P56589 373 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 NCBP1Q09161 790 aaKnown RBP14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 IKBKEQ14164 716 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 LONRF3Q496Y0 759 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 TPRNQ4KMQ1 711 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 KRBA2Q6ZNG9 492 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 DYMQ7RTS9 669 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 FAM228AQ86W67 206 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 CCDC65Q8IXS2 484 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 MYCT1Q8N699 235 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 DBF4BQ8NFT6 615 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 BSNDQ8WZ55 320 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 KCNN1Q92952 543 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 PAGE5Q96GU1 130 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 PRIMPOLQ96LW4 560 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 C7orf25Q9BPX7 421 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 NTPCRQ9BSD7 190 aaKnown RBP14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 AGO3Q9H9G7 860 aaKnown RBP14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 ERVK-5Q9HDB9 667 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 KMT5AQ9NQR1 393 aa14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 NOC2LQ9Y3T9 749 aaKnown RBP14.32□□□□□ -0.12
SRGAP2C-204ENST00000613462 INO80B-WBP1J3KQ70 363 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 KINO60870 393 aaKnown RBP14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 PRPF40AO75400 957 aaKnown RBP14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 ACRP10323 421 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 MAPTP10636 758 aaKnown RBP14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 AXLP30530 894 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 ASIC1P78348 528 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 MBTD1Q05BQ5 628 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 NFX1Q12986 1120 aaKnown RBP14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 SNW1Q13573 536 aaKnown RBP14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 MAPK6Q16659 721 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 FAM187BQ17R55 369 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 TMEM240Q5SV17 173 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 ZNF365Q70YC5 407 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 CATSPER4Q7RTX7 472 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 FAM178BQ8IXR5 827 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 ENGASEQ8NFI3 743 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 DNAJC19Q96DA6 116 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 VWCEQ96DN2 955 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 ZNF668Q96K58 619 aaPredicted RBP14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 ZHX3Q9H4I2 956 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 TMEM134Q9H6X4 195 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 CHST12Q9NRB3 414 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 OLFML3Q9NRN5 406 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 PRMT7Q9NVM4 692 aaPredicted RBP14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 DACT1Q9NYF0 836 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 ARHGAP28Q9P2N2 729 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 ST3GAL5Q9UNP4 418 aa14.31□□□□□ -0.12
SRGAP2C-204ENST00000613462 PVALEFA0A1B0GWK0 134 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 GTPBP6O43824 516 aaPredicted RBP14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 TRAK2O60296 914 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 IDEP14735 1019 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 ZSCAN20P17040 1043 aaPredicted RBP14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 AFMP43652 599 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 EPHB4P54760 987 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 ALCAMQ13740 583 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 C16orf59Q7L2K0 433 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 ELOA2Q8IYF1 753 aaPredicted RBP14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 STAMQ92783 540 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 CCDC51Q96ER9 411 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 CCDC113Q9H0I3 377 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 TSPYL2Q9H2G4 693 aaPredicted RBP14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 ST6GALNAC4Q9H4F1 302 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 MINDY3Q9H8M7 445 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 C1orf112Q9NSG2 853 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 AGPAT5Q9NUQ2 364 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 PANK4Q9NVE7 773 aa14.3□□□□□ -0.12
SRGAP2C-204ENST00000613462 CITO14578 2027 aa14.29□□□□□ -0.12
SRGAP2C-204ENST00000613462 DENND3A2RUS2 1198 aa14.29□□□□□ -0.12
SRGAP2C-204ENST00000613462 SFI1A8K8P3 1242 aa14.29□□□□□ -0.12
SRGAP2C-204ENST00000613462 K7ENM7 598 aa14.29□□□□□ -0.12
SRGAP2C-204ENST00000613462 K7ERI5 159 aa14.29□□□□□ -0.12
SRGAP2C-204ENST00000613462 SLC16A4O15374 487 aa14.29□□□□□ -0.12
SRGAP2C-204ENST00000613462 GADD45BO75293 160 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms