RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ERICH4A6NGS2 130 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 VWA5AO00534 786 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 HSF2BPO75031 334 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 HEXIM1O94992 359 aaKnown RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 IVLP07476 585 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 TRIM49P0CI25 452 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 TRIM49CP0CI26 452 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 ZBTB48P10074 688 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 GYS2P54840 703 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 PPFIA1Q13136 1202 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 CUL1Q13616 776 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 EPC2Q52LR7 807 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 DEFB132Q7Z7B7 95 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 NLRX1Q86UT6 975 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 NT5DC3Q86UY8 548 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 VSIG10LQ86VR7 867 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 RHOT2Q8IXI1 618 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 OLIG1Q8TAK6 271 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 LNX1Q8TBB1 728 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 KRT12Q99456 494 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 NTPCRQ9BSD7 190 aaKnown RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 IKZF4Q9H2S9 585 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 RPAP3Q9H6T3 665 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-224ENST00000610907 EPB41L5Q9HCM4 733 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 SMARCAL1Q9NZC9 954 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 ZNF112Q9UJU3 913 aa11.33□□□□□ -0.6
PABPC1-224ENST00000610907 PFASO15067 1338 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 EMSYQ7Z589 1322 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 CEP104O60308 925 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 STAM2O75886 525 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 GLI1P08151 1106 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 CAPN2P17655 700 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 EIF2AK2P19525 551 aaKnown RBP11.32□□□□□ -0.6
PABPC1-224ENST00000610907 SCP2P22307 547 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 CCND2P30279 289 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 BACE1P56817 501 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 GUCY2DQ02846 1103 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 PPATQ06203 517 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 DAAM2Q86T65 1068 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 USP37Q86T82 979 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 GLYCTKQ8IVS8 523 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 GSPT2Q8IYD1 628 aaKnown RBP11.32□□□□□ -0.6
PABPC1-224ENST00000610907 SCYL3Q8IZE3 742 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 METTL13Q8N6R0 699 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 C1orf131Q8NDD1 294 aaKnown RBP11.32□□□□□ -0.6
PABPC1-224ENST00000610907 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 KIFAP3Q92845 792 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 CDHR1Q96JP9 859 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 RUFY1Q96T51 708 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 NAP1L3Q99457 506 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-224ENST00000610907 AGPAT1Q99943 283 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 MOV10L1Q9BXT6 1211 aaKnown RBP11.32□□□□□ -0.6
PABPC1-224ENST00000610907 PDGFDQ9GZP0 370 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-224ENST00000610907 SLITRK6Q9H5Y7 841 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 HSPBP1Q9NZL4 362 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 PKD2L1Q9P0L9 805 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 PACSIN2Q9UNF0 486 aaPredicted RBP11.32□□□□□ -0.6
PABPC1-224ENST00000610907 PCDHA10Q9Y5I2 948 aa11.32□□□□□ -0.6
PABPC1-224ENST00000610907 FER1L6Q2WGJ9 1857 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 LTBP3Q9NS15 1303 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 TMCO5BA8MYB1 307 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 C19orf81C9J6K1 198 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-224ENST00000610907 FOXN3O00409 490 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-224ENST00000610907 ATP2A1O14983 1001 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 PHACTR2O75167 634 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 MYCLP12524 364 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-224ENST00000610907 GTF2H1P32780 548 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 HNRNPH2P55795 449 aaKnown RBP11.31□□□□□ -0.6
PABPC1-224ENST00000610907 RTP1P59025 263 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 MTMR2Q13614 643 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 ZSCAN26Q16670 478 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 XKR9Q5GH70 373 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 MAATS1Q7Z4T9 603 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 CD302Q8IX05 232 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 RDH13Q8NBN7 331 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 CCDC26Q8TAB7 109 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 FAM76AQ8TAV0 307 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 SLC35G2Q8TBE7 412 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 MORC4Q8TE76 937 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 ISCUQ9H1K1 167 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 TAF1DQ9H5J8 278 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-224ENST00000610907 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-224ENST00000610907 ADAMTS5Q9UNA0 930 aa11.31□□□□□ -0.6
PABPC1-224ENST00000610907 NFASCO94856 1347 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 H0YCG3 227 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 BACH1O14867 736 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 ATP9AO75110 1047 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 NR3C2P08235 984 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 GZMAP12544 262 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 CARSP49589 748 aaKnown RBP11.3□□□□□ -0.6
PABPC1-224ENST00000610907 PEX3P56589 373 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 PPP3CAQ08209 521 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 SPP2Q13103 211 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 PLS1Q14651 629 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 MAP4K3Q8IVH8 894 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 IQCKQ8N0W5 287 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms