RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 SMAP1Q8IYB5 467 aaPredicted RBP13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 TMTC2Q8N394 836 aa13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 FANCBQ8NB91 859 aa13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 SUMF1Q8NBK3 374 aa13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 CMASQ8NFW8 434 aaPredicted RBP13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 STAMQ92783 540 aa13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 TMEM87BQ96K49 555 aa13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 MYADMQ96S97 322 aa13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 WDR6Q9NNW5 1121 aaKnown RBP13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 TBC1D22BQ9NU19 505 aa13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 PCDHA10Q9Y5I2 948 aa13.31□□□□□ -0.28
PDLIM1P1-201ENST00000604187 KAT6AQ92794 2004 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 MEIS3P2A8K0S8 358 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 C2CD2LO14523 706 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 OATP04181 439 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 MYBP10242 640 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 CHMLP26374 656 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 ZNF280BQ86YH2 543 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 FOXQ1Q9C009 403 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 CHST12Q9NRB3 414 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 MRPL17Q9NRX2 175 aaKnown RBP13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 NCDNQ9UBB6 729 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 PIN4Q9Y237 131 aaKnown RBP13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 SAMM50Q9Y512 469 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 CEP295Q9C0D2 2601 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 CNTNAP5Q8WYK1 1306 aa13.3□□□□□ -0.28
PDLIM1P1-201ENST00000604187 CCDC195A0A1B0GUA6 201 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 SMCO2A6NFE2 343 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 ZNF862O60290 1169 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 LILRB3O75022 631 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 OFD1O75665 1012 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 GLULP15104 373 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 SFPQP23246 707 aaKnown RBP eCLIP13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 LIFRP42702 1097 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 CLK2P49760 499 aaKnown RBP13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 AK2P54819 239 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 PRKCEQ02156 737 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 DRP2Q13474 957 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 JAKMIP3Q5VZ66 844 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 DCLRE1AQ6PJP8 1040 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 MAML2Q8IZL2 1156 aaPredicted RBP13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 ST13P5Q8NFI4 369 aaPredicted RBP13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 PJA1Q8NG27 643 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 SMG7Q92540 1137 aaKnown RBP13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 TRAIPQ9BWF2 469 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 GCOM2Q9BZD3 368 aaPredicted RBP13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 STK39Q9UEW8 545 aa13.29□□□□□ -0.28
PDLIM1P1-201ENST00000604187 WDR64B1ANS9 1081 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 INPPL1O15357 1258 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 TEX28O15482 410 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 SGSM2O43147 1006 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 LRRN2O75325 713 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 RFPL2O75678 378 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 GLUD1P00367 558 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 URODP06132 367 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 ADH1AP07327 375 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 SKIP12755 728 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 SETQ01105 290 aaPredicted RBP13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 UGCGQ16739 394 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 TTC22Q5TAA0 569 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 ELMSAN1Q6PJG2 1045 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 GET4Q7L5D6 327 aaPredicted RBP13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 URGCPQ8TCY9 931 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 CRYGNQ8WXF5 182 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 MAP4K1Q92918 833 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 NXPE3Q969Y0 559 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 NRBP2Q9NSY0 501 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 FAM105AQ9NUU6 356 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 BARHL2Q9NY43 387 aa13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 V9GY48 417 aaPredicted RBP13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 MAP1BP46821 2468 aaKnown RBP13.28□□□□□ -0.28
PDLIM1P1-201ENST00000604187 CFAP47Q6ZTR5 3102 aa13.27□□□□□ -0.28
PDLIM1P1-201ENST00000604187 A0A087WZ62 844 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 DDHD2O94830 711 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CYP3A4P08684 503 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RAB27AP51159 221 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ATXN1P54253 815 aaKnown RBP13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 HTR4Q13639 388 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PRR16Q569H4 304 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 VARS2Q5ST30 1063 aaKnown RBP13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CYP26C1Q6V0L0 522 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ZNF707Q96C28 371 aaPredicted RBP13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RPS6KC1Q96S38 1066 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 FDXACB1Q9BRP7 624 aaPredicted RBP13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SLC2A4RGQ9NR83 387 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SPATA6Q9NWH7 488 aaPredicted RBP13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 DPP7Q9UHL4 492 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 NUMBLQ9Y6R0 609 aa13.27□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ANHXE9PGG2 379 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 hCG_1984214I3L0E3 225 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SPTLC1O15269 473 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CHMP2AO43633 222 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SOD2P04179 222 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SPATA31D3P0C874 917 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms