RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 NPHP3-ACAD11A0A0J9YXS1 232 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 A0A1B0GVL5 298 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.33■□□□□ 0.04
RNF40-212ENST00000602784 GOLGA6L4A6NEF3 574 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 MYMKA6NI61 221 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 CSDE1O75534 798 aaKnown RBP15.33■□□□□ 0.04
RNF40-212ENST00000602784 KRT18P05783 430 aaKnown RBP15.33■□□□□ 0.04
RNF40-212ENST00000602784 SLFN14P0C7P3 912 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 ATP2A2P16615 1042 aaKnown RBP15.33■□□□□ 0.04
RNF40-212ENST00000602784 ZSCAN20P17040 1043 aaPredicted RBP15.33■□□□□ 0.04
RNF40-212ENST00000602784 AXLP30530 894 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 SMTNP53814 917 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 PEX3P56589 373 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 MBTD1Q05BQ5 628 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 NCBP1Q09161 790 aaKnown RBP15.33■□□□□ 0.04
RNF40-212ENST00000602784 RAD51AP2Q09MP3 1159 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 FAM187BQ17R55 369 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 RTN4RL1Q86UN2 441 aaPredicted RBP15.33■□□□□ 0.04
RNF40-212ENST00000602784 ZBTB8OSQ8IWT0 167 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 TMEM87AQ8NBN3 555 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 DEPTORQ8TB45 409 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.04
RNF40-212ENST00000602784 DDX12PQ92771 950 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 PRIMPOLQ96LW4 560 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 ADAM2Q99965 735 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 TRAIPQ9BWF2 469 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 FZD8Q9H461 694 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 POLD4Q9HCU8 107 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 C1orf112Q9NSG2 853 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 DACT1Q9NYF0 836 aa15.33■□□□□ 0.04
RNF40-212ENST00000602784 DENND3A2RUS2 1198 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 SFI1A8K8P3 1242 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 H0YCG3 227 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 INO80B-WBP1J3KQ70 363 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 ERLIN2O94905 339 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 FAM13AO94988 1023 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 FGFR4P22455 802 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 HOXA11P31270 313 aaPredicted RBP15.32■□□□□ 0.04
RNF40-212ENST00000602784 SYKP43405 635 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 NDUFA8P51970 172 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 FAM189BP81408 668 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 SMAD3P84022 425 aaKnown RBP15.32■□□□□ 0.04
RNF40-212ENST00000602784 HABP4Q5JVS0 413 aaKnown RBP15.32■□□□□ 0.04
RNF40-212ENST00000602784 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.32■□□□□ 0.041e-10■■■■□ 24.7
RNF40-212ENST00000602784 SLC24A5Q71RS6 500 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 HERC6Q8IVU3 1022 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 CRIPAKQ8N1N5 446 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 FSIP1Q8NA03 581 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 LINC01599Q8WXQ3 324 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 TOP1MTQ969P6 601 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 DNAJC19Q96DA6 116 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 TMEM134Q9H6X4 195 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 PARVGQ9HBI0 331 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 AGPAT5Q9NUQ2 364 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 PRMT7Q9NVM4 692 aaPredicted RBP15.32■□□□□ 0.04
RNF40-212ENST00000602784 ARHGAP28Q9P2N2 729 aa15.32■□□□□ 0.04
RNF40-212ENST00000602784 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 C9IYK1 514 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 ACTN4O43707 911 aaKnown RBP15.31■□□□□ 0.04
RNF40-212ENST00000602784 MGEA5O60502 916 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 TBCAO75347 108 aaKnown RBP15.31■□□□□ 0.04
RNF40-212ENST00000602784 GAP43P17677 238 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 ABCD1P33897 745 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 DEFB103AP81534 67 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 MAPK6Q16659 721 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 AMHR2Q16671 573 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 CEP57L1Q8IYX8 460 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 SLC17A8Q8NDX2 589 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 CCDC51Q96ER9 411 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 C7orf25Q9BPX7 421 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 CCDC113Q9H0I3 377 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 KMT5AQ9NQR1 393 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 SEL1LQ9UBV2 794 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 TTC3P53804 2025 aa15.31■□□□□ 0.04
RNF40-212ENST00000602784 A0A0U1RQF3 1178 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 FRMD3A2A2Y4 597 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 K7ERI5 159 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 ACKR2O00590 384 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 TSPAN1O60635 241 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 GJB5O95377 273 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 MAPTP10636 758 aaKnown RBP15.3■□□□□ 0.04
RNF40-212ENST00000602784 SKIP12755 728 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 MYH11P35749 1972 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 SARSP49591 514 aaKnown RBP15.3■□□□□ 0.04
RNF40-212ENST00000602784 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
RNF40-212ENST00000602784 LONRF3Q496Y0 759 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 DYMQ7RTS9 669 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 NPAS4Q8IUM7 802 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 ADGRA3Q8IWK6 1321 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 MYOCDQ8IZQ8 938 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 MYCT1Q8N699 235 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 TMEM161BQ8NDZ6 487 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 TRIM9Q9C026 710 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 GOLPH3LQ9H4A5 285 aa15.3■□□□□ 0.04
RNF40-212ENST00000602784 ELAC1Q9H777 363 aaKnown RBP15.3■□□□□ 0.04
RNF40-212ENST00000602784 PIN4Q9Y237 131 aaKnown RBP15.3■□□□□ 0.04
RNF40-212ENST00000602784 CNTNAP2Q9UHC6 1331 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 A0A1B0GUA9 196 aa15.29■□□□□ 0.04
RNF40-212ENST00000602784 SLC16A4O15374 487 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms