RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 KIAA1024Q9UPX6 916 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 VPS37CA5D8V6 355 aaPredicted RBP24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 INO80B-WBP1J3KQ70 363 aa24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 ATF7P17544 494 aaPredicted RBP24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 RAB27AP51159 221 aa24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 NCBP1Q09161 790 aaKnown RBP24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 PCBP1Q15365 356 aaKnown RBP eCLIP24.29■■□□□ 1.481e-7■■■■□ 23.7
PPFIA3-208ENST00000602726 AAK1Q2M2I8 961 aa24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 BRAPQ7Z569 592 aa24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 GPRC5CQ9NQ84 441 aa24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 FAM105AQ9NUU6 356 aa24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 DDX19AQ9NUU7 478 aaKnown RBP24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 BRWD1Q9NSI6 2320 aa24.29■■□□□ 1.48
PPFIA3-208ENST00000602726 KIAA1671Q9BY89 1806 aa24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 K7ELQ4 463 aaPredicted RBP24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 ITGB1P05556 798 aa24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 CYP11B2P19099 503 aa24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 CLLU1OSQ5K130 101 aa24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 IFNLR1Q8IU57 520 aaPredicted RBP24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 LRRC43Q8N309 656 aa24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 HELQQ8TDG4 1101 aa24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 SYMPKQ92797 1274 aaKnown RBP24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 INTS4Q96HW7 963 aaKnown RBP24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 NSUN3Q9H649 340 aaKnown RBP24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 CWH43Q9H720 699 aa24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 HCSTQ9UBK5 93 aa24.28■■□□□ 1.48
PPFIA3-208ENST00000602726 PP2D1A8MPX8 630 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 ZNF623O75123 536 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 CSPG5O95196 566 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 LAG3P18627 525 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 HOXA11P31270 313 aaPredicted RBP24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 TFF2Q03403 129 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 CSPP1Q1MSJ5 1256 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 LONRF3Q496Y0 759 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 TCEAL5Q5H9L2 206 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 COLGALT1Q8NBJ5 622 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 SPPL3Q8TCT6 385 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 PGBD4Q96DM1 585 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 COL25A1Q9BXS0 654 aaPredicted RBP24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 BHMT2Q9H2M3 363 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 PCDHB2Q9Y5E7 798 aa24.27■■□□□ 1.48
PPFIA3-208ENST00000602726 TTC28Q96AY4 2481 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 LRRIQ4A6NIV6 560 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 CDC25AP30304 524 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 AXLP30530 894 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 MBTD1Q05BQ5 628 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 ARL6IP4Q66PJ3 421 aaKnown RBP24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 LRRC55Q6ZSA7 311 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 THNSL1Q8IYQ7 743 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 LPPQ93052 612 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 MRPL9Q9BYD2 267 aaKnown RBP24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 NFKBIZQ9BYH8 718 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 DNM3Q9UQ16 869 aa24.26■■□□□ 1.47
PPFIA3-208ENST00000602726 VCANP13611 3396 aa24.25■■□□□ 1.47
PPFIA3-208ENST00000602726 SPTBN5Q9NRC6 3674 aaKnown RBP24.25■■□□□ 1.47
PPFIA3-208ENST00000602726 VWA3AA6NCI4 1184 aa24.25■■□□□ 1.47
PPFIA3-208ENST00000602726 TSPAN1O60635 241 aa24.25■■□□□ 1.47
PPFIA3-208ENST00000602726 GLB1LQ6UWU2 654 aa24.25■■□□□ 1.47
PPFIA3-208ENST00000602726 POF1BQ8WVV4 589 aa24.25■■□□□ 1.47
PPFIA3-208ENST00000602726 RSPH1Q8WYR4 309 aa24.25■■□□□ 1.47
PPFIA3-208ENST00000602726 FOXD4L1Q9NU39 408 aa24.25■■□□□ 1.47
PPFIA3-208ENST00000602726 FGF18O76093 207 aa24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 BMP15O95972 392 aa24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 DNAJB1P25685 340 aa24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 ZRSR1Q15695 479 aaKnown RBP24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 UBXN11Q5T124 520 aa24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 NOTUMQ6P988 496 aa24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 ZBTB8OSQ8IWT0 167 aa24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 CCDC51Q96ER9 411 aa24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 ZNF558Q96NG5 402 aa24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 MMTAG2Q9BU76 263 aaKnown RBP24.24■■□□□ 1.47
PPFIA3-208ENST00000602726 XIRP2A4UGR9 3374 aa24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 E9PMD0 336 aa24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 EYA4O95677 639 aa24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 SYT1P21579 422 aa24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 UBE3AQ05086 875 aa24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 CAMK1Q14012 370 aa24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 KCNT2Q6UVM3 1135 aa24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 MRPL10Q7Z7H8 261 aaKnown RBP24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 CPB2Q96IY4 423 aa24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 UBE2ZQ9H832 354 aaPredicted RBP24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 INPP5FQ9Y2H2 1132 aa24.23■■□□□ 1.47
PPFIA3-208ENST00000602726 MEIS3P2A8K0S8 358 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 PPP2R5AQ15172 486 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 AMHR2Q16671 573 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 NOMO2Q5JPE7 1267 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 CNNM3Q8NE01 707 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 KIFAP3Q92845 792 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 PPP2R3CQ969Q6 453 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 SNX21Q969T3 373 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 IFT74Q96LB3 600 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 C2orf40Q9H1Z8 148 aa24.22■■□□□ 1.47
PPFIA3-208ENST00000602726 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.21■■□□□ 1.47
PPFIA3-208ENST00000602726 NCK2O43639 380 aa24.21■■□□□ 1.47
PPFIA3-208ENST00000602726 OFD1O75665 1012 aa24.21■■□□□ 1.47
PPFIA3-208ENST00000602726 ARF4P18085 180 aaPredicted RBP24.21■■□□□ 1.47
PPFIA3-208ENST00000602726 PPM1AP35813 382 aa24.21■■□□□ 1.47
PPFIA3-208ENST00000602726 NAMPTP43490 491 aa24.21■■□□□ 1.47
PPFIA3-208ENST00000602726 KCNQ1P51787 676 aa24.21■■□□□ 1.47
PPFIA3-208ENST00000602726 CDCA2Q69YH5 1023 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms