RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 FLT3LGP49771 235 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 BRDTQ58F21 947 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 MFSD14CQ5VZR4 134 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 CNGA4Q8IV77 575 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 KIAA1524Q8TCG1 905 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 CPLX3Q8WVH0 158 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 CCDC51Q96ER9 411 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 PANX2Q96RD6 677 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 TMEM134Q9H6X4 195 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 GABRQQ9UN88 632 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 LRRIQ4A6NIV6 560 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 MGAMO43451 1857 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 CNGA1P29973 690 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 CASP14P31944 242 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 KCNH2Q12809 1159 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 STRN3Q13033 797 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 MKRN4PQ13434 485 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 FIGNQ5HY92 759 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 TLK2Q86UE8 772 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 PCMTD1Q96MG8 357 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 AP5M1Q9H0R1 490 aa19.32■□□□□ 0.68
SHKBP1-224ENST00000600718 K7ERI5 159 aa19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 ZNF500O60304 480 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 GOLGA8FQ08AF8 430 aa19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 GOLGA8DPQ0D2H9 430 aa19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 DRP2Q13474 957 aa19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 EFCAB12Q6NXP0 572 aa19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 XXYLT1Q8NBI6 393 aa19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 TRAPPC12Q8WVT3 735 aa19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 RNF186Q9NXI6 227 aa19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 SUCLA2Q9P2R7 463 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 SIK3Q9Y2K2 1263 aa19.31■□□□□ 0.68
SHKBP1-224ENST00000600718 ANKRD63C9JTQ0 380 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 MAPK13O15264 365 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 ASAP2O43150 1006 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 ADCY3O60266 1144 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 MFAP3LO75121 409 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 C22orf31O95567 290 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 AFPP02771 609 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 AKR1A1P14550 325 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 FXR1P51114 621 aaKnown RBP eCLIP19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 LAMTOR4Q0VGL1 99 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 CAPSQ13938 189 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 TAS1R3Q7RTX0 852 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 LRRC71Q8N4P6 559 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 CBWD1Q9BRT8 395 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 PCIF1Q9H4Z3 704 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 HSPBP1Q9NZL4 362 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 CAPN11Q9UMQ6 739 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 TISP43B9A030 160 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 TRPA1O75762 1119 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 KLRC1P26715 233 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 CPT1AP50416 773 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 EFNA5P52803 228 aa19.3■□□□□ 0.68
SHKBP1-224ENST00000600718 TRIM21P19474 475 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 GARTP22102 1010 aa19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 VEGFBP49765 207 aa19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 IGBP1P78318 339 aa19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 PRKCZQ05513 592 aa19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 SLC35C1Q96A29 364 aa19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 BICD1Q96G01 975 aa19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 BAG1Q99933 345 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 LUC7L2Q9Y383 392 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 PHLPP2Q6ZVD8 1323 aa19.29■□□□□ 0.68
SHKBP1-224ENST00000600718 A0A1W2PQJ5 194 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 TTC26A0AVF1 554 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 STX10O60499 249 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 PIGRP01833 764 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 ADSSP30520 456 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 KCNMA1Q12791 1236 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 TFDP1Q14186 410 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 TCERG1LQ5VWI1 586 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 METTL13Q8N6R0 699 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 TRIB2Q92519 343 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 TTYH3Q9C0H2 523 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 C2orf40Q9H1Z8 148 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 MMRN2Q9H8L6 949 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 RRN3P2A6NIE6 340 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 HNRNPDLO14979 420 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 DUSP11O75319 330 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 CYBAP13498 195 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 KRT13P13646 458 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 HOXD10P28358 340 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 KRT9P35527 623 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 KCNJ6P48051 423 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 KLK7P49862 253 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 LIG4P49917 911 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 PPFIA1Q13136 1202 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 DCAF17Q5H9S7 520 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 CDCA2Q69YH5 1023 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 SLC39A4Q6P5W5 647 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 INTS8Q75QN2 995 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 ZBTB8OSQ8IWT0 167 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 TRPV1Q8NER1 839 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 NAA15Q9BXJ9 866 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 EDEM3Q9BZQ6 932 aa19.28■□□□□ 0.68
SHKBP1-224ENST00000600718 RNF225M0QZC1 329 aaPredicted RBP19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 F2P00734 622 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 SRGAP2CP0DJJ0 459 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 TMOD1P28289 359 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms