RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FAM126AQ9BYI3 521 aaPredicted RBP20.02■□□□□ 0.8
SSBP4-207ENST00000600244 AGO4Q9HCK5 861 aaKnown RBP20.02■□□□□ 0.8
SSBP4-207ENST00000600244 LTB4R2Q9NPC1 389 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 PRMT8Q9NR22 394 aaPredicted RBP20.02■□□□□ 0.8
SSBP4-207ENST00000600244 MRPL17Q9NRX2 175 aaKnown RBP20.02■□□□□ 0.8
SSBP4-207ENST00000600244 DACT1Q9NYF0 836 aa20.02■□□□□ 0.8
SSBP4-207ENST00000600244 BACH1O14867 736 aa20.01■□□□□ 0.79
SSBP4-207ENST00000600244 DARSP14868 501 aaKnown RBP20.01■□□□□ 0.79
SSBP4-207ENST00000600244 CLCN3P51790 818 aa20.01■□□□□ 0.79
SSBP4-207ENST00000600244 NOMO2Q5JPE7 1267 aa20.01■□□□□ 0.79
SSBP4-207ENST00000600244 N4BP2L1Q5TBK1 243 aaPredicted RBP20.01■□□□□ 0.79
SSBP4-207ENST00000600244 ANKRD45Q5TZF3 282 aa20.01■□□□□ 0.79
SSBP4-207ENST00000600244 FGF14Q92915 247 aa20.01■□□□□ 0.79
SSBP4-207ENST00000600244 ZNF302Q9NR11 478 aa20.01■□□□□ 0.79
SSBP4-207ENST00000600244 DPP7Q9UHL4 492 aa20.01■□□□□ 0.79
SSBP4-207ENST00000600244 SPDYE3A6NKU9 549 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 FGFR4P22455 802 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 SMARCA1P28370 1054 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 PHKA2P46019 1235 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 LAIR1Q6GTX8 287 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 ZNF280BQ86YH2 543 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 HDAC7Q8WUI4 952 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 DDX1Q92499 740 aaKnown RBP20■□□□□ 0.79
SSBP4-207ENST00000600244 LPPQ93052 612 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 CCDC136Q96JN2 1154 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 RPS6KC1Q96S38 1066 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 NT5C3AQ9H0P0 336 aa20■□□□□ 0.79
SSBP4-207ENST00000600244 ZFP37Q9Y6Q3 630 aaPredicted RBP20■□□□□ 0.79
SSBP4-207ENST00000600244 ZZEF1O43149 2961 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 MAGEB2O15479 319 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 TEX28O15482 410 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 OFD1O75665 1012 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 ADH1AP07327 375 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 RETP07949 1114 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 MYBP10242 640 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 TDGF1P13385 188 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 CD72P21854 359 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 FZD5Q13467 585 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 ZBTB41Q5SVQ8 909 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 SWSAP1Q6NVH7 229 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 ELMSAN1Q6PJG2 1045 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 PARM1Q6UWI2 310 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 GLB1LQ6UWU2 654 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
SSBP4-207ENST00000600244 GET4Q7L5D6 327 aaPredicted RBP19.99■□□□□ 0.79
SSBP4-207ENST00000600244 CHST12Q9NRB3 414 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 SEMA4GQ9NTN9 838 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 AKT3Q9Y243 479 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 ASPMQ8IZT6 3477 aa19.99■□□□□ 0.79
SSBP4-207ENST00000600244 MEIS3P2A8K0S8 358 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 MEIS1O00470 390 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 IFIT3O14879 490 aaKnown RBP19.98■□□□□ 0.79
SSBP4-207ENST00000600244 GDF9O60383 454 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 GLUD1P00367 558 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 RPS9P46781 194 aaKnown RBP19.98■□□□□ 0.79
SSBP4-207ENST00000600244 GPC3P51654 580 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 RNASELQ05823 741 aaKnown RBP19.98■□□□□ 0.79
SSBP4-207ENST00000600244 CSRP2Q16527 193 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 LPAL2Q16609 132 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 CEP55Q53EZ4 464 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 B4GALNT3Q6L9W6 998 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 EFCAB12Q6NXP0 572 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 PRR23CQ6ZRP0 262 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 CHD1LQ86WJ1 897 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 CELF5Q8N6W0 485 aaKnown RBP19.98■□□□□ 0.79
SSBP4-207ENST00000600244 ZNF668Q96K58 619 aaPredicted RBP19.98■□□□□ 0.79
SSBP4-207ENST00000600244 PIDD1Q9HB75 910 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 RXFP1Q9HBX9 757 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 RAB23Q9ULC3 237 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 MAFBQ9Y5Q3 323 aaPredicted RBP19.98■□□□□ 0.79
SSBP4-207ENST00000600244 MYH15Q9Y2K3 1946 aa19.98■□□□□ 0.79
SSBP4-207ENST00000600244 DDHD2O94830 711 aa19.97■□□□□ 0.79
SSBP4-207ENST00000600244 SOD2P04179 222 aa19.97■□□□□ 0.79
SSBP4-207ENST00000600244 TARSP26639 723 aaKnown RBP19.97■□□□□ 0.79
SSBP4-207ENST00000600244 AK2P54819 239 aa19.97■□□□□ 0.79
SSBP4-207ENST00000600244 CWC27Q6UX04 472 aaKnown RBP19.97■□□□□ 0.79
SSBP4-207ENST00000600244 RILPL2Q969X0 211 aa19.97■□□□□ 0.79
SSBP4-207ENST00000600244 MAP7D2Q96T17 732 aa19.97■□□□□ 0.79
SSBP4-207ENST00000600244 NELL2Q99435 816 aa19.97■□□□□ 0.79
SSBP4-207ENST00000600244 MAP3K14Q99558 947 aa19.97■□□□□ 0.79
SSBP4-207ENST00000600244 GBP3Q9H0R5 595 aa19.97■□□□□ 0.79
SSBP4-207ENST00000600244 SEC63Q9UGP8 760 aaKnown RBP19.97■□□□□ 0.79
SSBP4-207ENST00000600244 INPP5FQ9Y2H2 1132 aa19.97■□□□□ 0.79
SSBP4-207ENST00000600244 C2CD2LO14523 706 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 TM4SF5O14894 197 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 DHX15O43143 795 aaKnown RBP19.96■□□□□ 0.79
SSBP4-207ENST00000600244 ZNF623O75123 536 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 C1RP00736 705 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 LONRF3Q496Y0 759 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 MIS18BP1Q6P0N0 1132 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 TAS1R1Q7RTX1 841 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 LRRC71Q8N4P6 559 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 MYL10Q9BUA6 226 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 PRKD2Q9BZL6 878 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 LNPKQ9C0E8 428 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 PLEKHA4Q9H4M7 779 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 ZDHHC7Q9NXF8 308 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 SSX2IPQ9Y2D8 614 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 SPEGQ15772 3267 aa19.96■□□□□ 0.79
SSBP4-207ENST00000600244 DDX39AO00148 427 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms