RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CLLU1OSQ5K130 101 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 DTHD1Q6ZMT9 781 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 ZNF598Q86UK7 904 aaKnown RBP25.1■■□□□ 1.61
CCDC9-204ENST00000599398 LRRC43Q8N309 656 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 SNX29Q8TEQ0 813 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 TRAIPQ9BWF2 469 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 GPRC5CQ9NQ84 441 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 FAM105AQ9NUU6 356 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 STK24Q9Y6E0 443 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 TCF20Q9UGU0 1960 aaKnown RBP25.09■■□□□ 1.61
CCDC9-204ENST00000599398 INO80B-WBP1J3KQ70 363 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 LAG3P18627 525 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 MUTP22033 750 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 GLRA2P23416 452 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 PRPHP41219 470 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 RAB27AP51159 221 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 PTENP60484 403 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 PADI6Q6TGC4 694 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 THNSL1Q8IYQ7 743 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 IGSF22Q8N9C0 903 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 COLGALT1Q8NBJ5 622 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 MCPH1Q8NEM0 835 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 LPPQ93052 612 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 CWH43Q9H720 699 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 PLXNA4Q9HCM2 1894 aa25.09■■□□□ 1.61
CCDC9-204ENST00000599398 TTC28Q96AY4 2481 aa25.08■■□□□ 1.61
CCDC9-204ENST00000599398 KCNQ1P51787 676 aa25.08■■□□□ 1.61
CCDC9-204ENST00000599398 ECM1Q16610 540 aa25.08■■□□□ 1.61
CCDC9-204ENST00000599398 KRT79Q5XKE5 535 aa25.08■■□□□ 1.61
CCDC9-204ENST00000599398 LRRC55Q6ZSA7 311 aa25.08■■□□□ 1.61
CCDC9-204ENST00000599398 EP400NLQ6ZTU2 488 aa25.08■■□□□ 1.61
CCDC9-204ENST00000599398 SPPL3Q8TCT6 385 aa25.08■■□□□ 1.61
CCDC9-204ENST00000599398 POF1BQ8WVV4 589 aa25.08■■□□□ 1.61
CCDC9-204ENST00000599398 UBE2ZQ9H832 354 aaPredicted RBP25.08■■□□□ 1.61
CCDC9-204ENST00000599398 KIAA1024Q9UPX6 916 aa25.08■■□□□ 1.61
CCDC9-204ENST00000599398 VPS37CA5D8V6 355 aaPredicted RBP25.07■■□□□ 1.6
CCDC9-204ENST00000599398 LRRIQ4A6NIV6 560 aa25.07■■□□□ 1.6
CCDC9-204ENST00000599398 PP2D1A8MPX8 630 aa25.07■■□□□ 1.6
CCDC9-204ENST00000599398 DNAJB1P25685 340 aa25.07■■□□□ 1.6
CCDC9-204ENST00000599398 ATP2C1P98194 919 aaPredicted RBP25.07■■□□□ 1.6
CCDC9-204ENST00000599398 POU5F1BQ06416 359 aa25.07■■□□□ 1.6
CCDC9-204ENST00000599398 NCBP1Q09161 790 aaKnown RBP25.07■■□□□ 1.6
CCDC9-204ENST00000599398 IL17AQ16552 155 aa25.07■■□□□ 1.6
CCDC9-204ENST00000599398 CSPP1Q1MSJ5 1256 aa25.07■■□□□ 1.6
CCDC9-204ENST00000599398 DDX19AQ9NUU7 478 aaKnown RBP25.07■■□□□ 1.6
CCDC9-204ENST00000599398 PCDHB2Q9Y5E7 798 aa25.07■■□□□ 1.6
CCDC9-204ENST00000599398 FGF18O76093 207 aa25.06■■□□□ 1.6
CCDC9-204ENST00000599398 HOXA11P31270 313 aaPredicted RBP25.06■■□□□ 1.6
CCDC9-204ENST00000599398 PCBP1Q15365 356 aaKnown RBP eCLIP25.06■■□□□ 1.6
CCDC9-204ENST00000599398 IFNLR1Q8IU57 520 aaPredicted RBP25.06■■□□□ 1.6
CCDC9-204ENST00000599398 PGBD4Q96DM1 585 aa25.06■■□□□ 1.6
CCDC9-204ENST00000599398 MRPL9Q9BYD2 267 aaKnown RBP25.06■■□□□ 1.6
CCDC9-204ENST00000599398 BHMT2Q9H2M3 363 aa25.06■■□□□ 1.6
CCDC9-204ENST00000599398 TSPAN1O60635 241 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 ZNF623O75123 536 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 CYP11B2P19099 503 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 PDCP20941 246 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 KCNA5P22460 613 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 CDC25AP30304 524 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 MBTD1Q05BQ5 628 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 CAMK1Q14012 370 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 GLB1LQ6UWU2 654 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 ADAMTS19Q8TE59 1207 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 CPB2Q96IY4 423 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 ZNF558Q96NG5 402 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 INPP5FQ9Y2H2 1132 aa25.05■■□□□ 1.6
CCDC9-204ENST00000599398 VWA3AA6NCI4 1184 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 MEIS3P2A8K0S8 358 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 AXLP30530 894 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 PBX3P40426 434 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 ZRSR1Q15695 479 aaKnown RBP25.04■■□□□ 1.6
CCDC9-204ENST00000599398 NOTUMQ6P988 496 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 KCNT2Q6UVM3 1135 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 BRAPQ7Z569 592 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 MICAL1Q8TDZ2 1067 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 PPP2R3CQ969Q6 453 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 NFKBIZQ9BYH8 718 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 FOXD4L1Q9NU39 408 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 DNM3Q9UQ16 869 aa25.04■■□□□ 1.6
CCDC9-204ENST00000599398 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.03■■□□□ 1.6
CCDC9-204ENST00000599398 IRS1P35568 1242 aa25.03■■□□□ 1.6
CCDC9-204ENST00000599398 UBE3AQ05086 875 aa25.03■■□□□ 1.6
CCDC9-204ENST00000599398 UBXN11Q5T124 520 aa25.03■■□□□ 1.6
CCDC9-204ENST00000599398 ZBTB8OSQ8IWT0 167 aa25.03■■□□□ 1.6
CCDC9-204ENST00000599398 IGFLR1Q9H665 355 aa25.03■■□□□ 1.6
CCDC9-204ENST00000599398 CLDND1Q9NY35 253 aa25.03■■□□□ 1.6
CCDC9-204ENST00000599398 NCOR1O75376 2440 aa25.02■■□□□ 1.6
CCDC9-204ENST00000599398 E9PMD0 336 aa25.02■■□□□ 1.6
CCDC9-204ENST00000599398 K7ELQ4 463 aaPredicted RBP25.02■■□□□ 1.6
CCDC9-204ENST00000599398 BMP1P13497 986 aa25.02■■□□□ 1.6
CCDC9-204ENST00000599398 RNASELQ05823 741 aaKnown RBP25.02■■□□□ 1.6
CCDC9-204ENST00000599398 NOMO2Q5JPE7 1267 aa25.02■■□□□ 1.6
CCDC9-204ENST00000599398 RSPH1Q8WYR4 309 aa25.02■■□□□ 1.6
CCDC9-204ENST00000599398 PABPC5Q96DU9 382 aaKnown RBP25.02■■□□□ 1.6
CCDC9-204ENST00000599398 CCDC51Q96ER9 411 aa25.02■■□□□ 1.6
CCDC9-204ENST00000599398 POLD4Q9HCU8 107 aa25.02■■□□□ 1.6
CCDC9-204ENST00000599398 TLR9Q9NR96 1032 aa25.02■■□□□ 1.6
CCDC9-204ENST00000599398 B4GALT5O43286 388 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 NCK2O43639 380 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 ZC3H11AO75152 810 aaKnown RBP eCLIP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms