RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 EFNA5P52803 228 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 RAD51AP2Q09MP3 1159 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 DMP1Q13316 513 aaPredicted RBP22.46■■□□□ 1.19
PNKP-211ENST00000598020 FAM187BQ17R55 369 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 HABP4Q5JVS0 413 aaKnown RBP22.46■■□□□ 1.19
PNKP-211ENST00000598020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.46■■□□□ 1.19
PNKP-211ENST00000598020 CATSPER4Q7RTX7 472 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 ZBTB8OSQ8IWT0 167 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 MRPS27Q92552 414 aaKnown RBP22.46■■□□□ 1.19
PNKP-211ENST00000598020 KCNN1Q92952 543 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 FZD8Q9H461 694 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 RGS18Q9NS28 235 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 C1orf112Q9NSG2 853 aa22.46■■□□□ 1.19
PNKP-211ENST00000598020 LARSQ9P2J5 1176 aaKnown RBP22.46■■□□□ 1.19
PNKP-211ENST00000598020 PTPRSQ13332 1948 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 MGEA5O60502 916 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 KRT18P05783 430 aaKnown RBP22.45■■□□□ 1.18
PNKP-211ENST00000598020 ATP2A2P16615 1042 aaKnown RBP22.45■■□□□ 1.18
PNKP-211ENST00000598020 ZSCAN20P17040 1043 aaPredicted RBP22.45■■□□□ 1.18
PNKP-211ENST00000598020 FGFR4P22455 802 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 PEX3P56589 373 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 DEFB103AP81534 67 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 CNNM4Q6P4Q7 775 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 PPP4R3CPQ6ZMV5 832 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 CLEC17AQ6ZS10 378 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 TMEM87AQ8NBN3 555 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 DEPTORQ8TB45 409 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 DDX12PQ92771 950 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 TOP1MTQ969P6 601 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 DNAJC19Q96DA6 116 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 PRIMPOLQ96LW4 560 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 ADAM2Q99965 735 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 TRAIPQ9BWF2 469 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 AGPAT5Q9NUQ2 364 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 ARHGAP28Q9P2N2 729 aa22.45■■□□□ 1.18
PNKP-211ENST00000598020 SFI1A8K8P3 1242 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 INO80B-WBP1J3KQ70 363 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 SLFN14P0C7P3 912 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 AXLP30530 894 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 FAM189BP81408 668 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 SMAD3P84022 425 aaKnown RBP22.44■■□□□ 1.18
PNKP-211ENST00000598020 AMPD3Q01432 767 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 AMHR2Q16671 573 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 PHLPP2Q6ZVD8 1323 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 SLC24A5Q71RS6 500 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 ADGRA3Q8IWK6 1321 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 CRIPAKQ8N1N5 446 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 FSIP1Q8NA03 581 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 CCDC113Q9H0I3 377 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 TMEM134Q9H6X4 195 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 PARVGQ9HBI0 331 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 PRMT7Q9NVM4 692 aaPredicted RBP22.44■■□□□ 1.18
PNKP-211ENST00000598020 DACT1Q9NYF0 836 aa22.44■■□□□ 1.18
PNKP-211ENST00000598020 DENND3A2RUS2 1198 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 GOLGA6L4A6NEF3 574 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 C9IYK1 514 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 ACTN4O43707 911 aaKnown RBP22.43■■□□□ 1.18
PNKP-211ENST00000598020 TSPAN1O60635 241 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 ERLIN2O94905 339 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 FAM13AO94988 1023 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 SCP2P22307 547 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 HOXA11P31270 313 aaPredicted RBP22.43■■□□□ 1.18
PNKP-211ENST00000598020 SYKP43405 635 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 NDUFA8P51970 172 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 SMTNP53814 917 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 CACNB1Q02641 598 aaPredicted RBP22.43■■□□□ 1.18
PNKP-211ENST00000598020 HERC6Q8IVU3 1022 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 KMT5AQ9NQR1 393 aa22.43■■□□□ 1.18
PNKP-211ENST00000598020 RNF216Q9NWF9 866 aaPredicted RBP22.43■■□□□ 1.18
PNKP-211ENST00000598020 FRMD3A2A2Y4 597 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 CCDC169A6NNP5 214 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 TBCAO75347 108 aaKnown RBP22.42■■□□□ 1.18
PNKP-211ENST00000598020 GJB5O95377 273 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 SARSP49591 514 aaKnown RBP22.42■■□□□ 1.18
PNKP-211ENST00000598020 NCBP1Q09161 790 aaKnown RBP22.42■■□□□ 1.18
PNKP-211ENST00000598020 MAPK6Q16659 721 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 FAM109BQ6ICB4 259 aaPredicted RBP22.42■■□□□ 1.18
PNKP-211ENST00000598020 DYMQ7RTS9 669 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 MYOCDQ8IZQ8 938 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 CCDC51Q96ER9 411 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 C7orf25Q9BPX7 421 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 GOLPH3LQ9H4A5 285 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 SERTAD1Q9UHV2 236 aa22.42■■□□□ 1.18
PNKP-211ENST00000598020 H0YCG3 227 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 ACKR2O00590 384 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 GAP43P17677 238 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 NCKAP1LP55160 1127 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 CEP57L1Q8IYX8 460 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 MYCT1Q8N699 235 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 TMEM161BQ8NDZ6 487 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 KIFC3Q9BVG8 833 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 TRIM9Q9C026 710 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 ELAC1Q9H777 363 aaKnown RBP22.41■■□□□ 1.18
PNKP-211ENST00000598020 SEL1LQ9UBV2 794 aa22.41■■□□□ 1.18
PNKP-211ENST00000598020 PIN4Q9Y237 131 aaKnown RBP22.41■■□□□ 1.18
PNKP-211ENST00000598020 A0A0U1RQF3 1178 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 GRXCR1A8MXD5 290 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 K7ERI5 159 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 SLC16A4O15374 487 aa22.4■■□□□ 1.18
PNKP-211ENST00000598020 MAPTP10636 758 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms